| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1817 |
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| Symbol | |
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| ID | 6274443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2205553 |
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| End bp | 2206458 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613881 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001878416 |
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| Protein GI | 187736304 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0235371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.425019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACAGAA CATTGGTGTT CGGGGCGGAC GGCCGGGTGG GAAGCCGTCT GGCAGCGTAT
CTGGAAGAAC ATGGCCTGGA GGTGGTGAAG TGCGGACGGG GCTTTTGTGA TTTGAAGGAT
TTAAGCGCTT TGAAACGTGT TCTGCTTTCT TCCGGAGCCA CTCATGTGGT GAATTGCGCC
GCTGTGAGCG GATTGGAAGC CTGCCTGGAT GATCCGGAGA CGGCCCACTG CGTCAACGCC
ATGGCTCCGG AGATGATGGC GCGCATTTGC CGCCTGGAGG GCATGCGCTT TATCCATTTG
AGTACGGATT ATGTGCTGGA CGGCAGGAGG AGAGGTTTGA AAACGGAGGA GGGGAAGTGC
CGCCCCGTAA ATGTGTACGG AGAGTCCAAG CTGGAGGCGG AATTCCGTGT GCGGGAGGAG
ATGCCGGACG CTCTGATAGC CCGCGTTTCC TGGGTATTCG GCAATCCGGA ACGGCCCTCA
TTCCCGGAAA TGGTGCTGCG GCGGGCGATG AAAAGGGAGC CCCTGGCCGC TGTGGCGGAT
AAATGGTCCA TGCCTACATG GGTGGAAGAT TTATGTGCAT GGCTCCGTTT TCTGGCTTAT
GAGAGCGGGG CGTCCGGCGT GCTGCATCTG TGTCAGTCCG GAGAGCCTGT TTCCTGGCAC
AGTTATGCCG TGGCCGTGCT GAAATGCGCC GTGAAGCACG GGTTACTGCC TTCTTTGCCG
CCTGTGGCGG AACAAAAGCT CGACGAACAG GCCGGTTTCA GGGATGCTCG GCCCCGGCAT
ACCGCCATGT CCAGCGAACG CCTCTCTTCC CTGATGAAGC AGCCCGTGAG GGCGTATGAA
GAGGCCATTG ACATGGCCGT GGCCCGCTAT GCCGCAGATC CAACCTTTCT CTCCAGCATT
TCATGA
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| Protein sequence | MYRTLVFGAD GRVGSRLAAY LEEHGLEVVK CGRGFCDLKD LSALKRVLLS SGATHVVNCA
AVSGLEACLD DPETAHCVNA MAPEMMARIC RLEGMRFIHL STDYVLDGRR RGLKTEEGKC
RPVNVYGESK LEAEFRVREE MPDALIARVS WVFGNPERPS FPEMVLRRAM KREPLAAVAD
KWSMPTWVED LCAWLRFLAY ESGASGVLHL CQSGEPVSWH SYAVAVLKCA VKHGLLPSLP
PVAEQKLDEQ AGFRDARPRH TAMSSERLSS LMKQPVRAYE EAIDMAVARY AADPTFLSSI
S
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