Gene Amuc_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1813 
Symbol 
ID6274489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2199958 
End bp2201343 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content59% 
IMG OID642613877 
ProductMATE efflux family protein 
Protein accessionYP_001878412 
Protein GI187736300 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000145997 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0820418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCC AGTCACGCAA CATCGCAGAA TTGGAAAACG CATCCGTATG GCGTCTGCTG 
ATCCAGTACT CCCTGCCCTC CATCGCCGGC ATGGTGGTAT ACTCCCTGTA CAACATCATT
GACAGCGTGT TTATCGGTCA CGGCGTGGGG CCTCTGGCCC TGTCCGGCCT GGCCGTCACC
TTCCCCATCA TGAACCTGAC TTTCGCCCTG GGCACGCTGG TAGGCATCGG CGGGGCGGCC
ATCAGCTCCA TCCGGCTGGG AAGAAAAGAC CAGGAAGGAA CTGAGCGTAC GCTTGGCAAC
GTCCTCATCA TGAGTCTGAT TGCCGCTGTG GTGCTGGTGA TTCCCACGCT TCTTTTCCTT
ACGGAAATCC TGACCGCCTT CGGCGCCAGC GGGCAAACCC TCACCTATGC GTACGACTTC
ATGCTTATTA CCTTGCTGGG CCTGCCCGTC ACGTACGTCT TCTTCAACCT CAATCATGTG
ATGAGAGCTA CCGGCTACCC TAAAAAAGCC ATGGGCTCCA CCCTTCTTTC CGTAGGAATC
AACATCATTC TGGCTCCCAT CTTCATCTTC TGGTTCAAAT GGGGCATTAC CGGAGCAGCC
GTGGCCACCC TTCTCGCCCA GGTCGTCGGC ATGGTGCGCG TGCTGTTACA CTTTTCCGAT
GCGGCCAGCA CGGTCCACTT CCGCCGCGGC ATCTGGCAGC TGCGCAAGAC CATCGTCACC
GGCATCCTGT CCATCGGGAT GGCTCCCTGC CTGGTAAACG TCTGCGGCAG CGCGGTCACC
GTCGCCATCA ACAGGCAACT TGCGGATCAC GGGGGGGACC TGGCCATCGG GGCCTACGGC
ATCATCAACC GCATTCTTAT TCTGTTCGCC ATGCTCGTCA TCGGCCTCAC TCAGGGAATG
CAGCCCATCA TCGGCTACAA CCACGGAGCC ATGAAGCCGG GCCGCGTTCT GCTCACCCTT
AAATACGGAG TTCTGGCAGG GACATCCTTC ACCACGCTGG GATTCCTGGC CTGCGTCTTC
TTTCCCCGCG GCATTGCCGG GCTCTTCACG GATGACGCCT CGCTCATCAG CCTGGCGGCC
AACGGTCTGA TCATCTGCGT GCTGGCCTTT CCGCTCATCG GCAGCCAGAT CATCATCGGG
AACTTCTTCC AGGCCATTGG AAAAGCCCGT CTGGCAATCT TCCTGTCCCT GACGCGCCAA
ATGCTCTTCC TCCTGCCGTT CCTGCTGGTC CTGCCCCGTT TCTGGGGACA GGACGGAGTC
TGGGCATCCC TTCCTCTGGC AGACGTGCTT TCCTTTATCG TCACCCTGCT CTTCATCCGC
CGGTTCCTGA AATACTACCG GCTGAAAAAC AGGCACTACC TGGTTCCCGG CACGGGAAAG
GCATAA
 
Protein sequence
MAAQSRNIAE LENASVWRLL IQYSLPSIAG MVVYSLYNII DSVFIGHGVG PLALSGLAVT 
FPIMNLTFAL GTLVGIGGAA ISSIRLGRKD QEGTERTLGN VLIMSLIAAV VLVIPTLLFL
TEILTAFGAS GQTLTYAYDF MLITLLGLPV TYVFFNLNHV MRATGYPKKA MGSTLLSVGI
NIILAPIFIF WFKWGITGAA VATLLAQVVG MVRVLLHFSD AASTVHFRRG IWQLRKTIVT
GILSIGMAPC LVNVCGSAVT VAINRQLADH GGDLAIGAYG IINRILILFA MLVIGLTQGM
QPIIGYNHGA MKPGRVLLTL KYGVLAGTSF TTLGFLACVF FPRGIAGLFT DDASLISLAA
NGLIICVLAF PLIGSQIIIG NFFQAIGKAR LAIFLSLTRQ MLFLLPFLLV LPRFWGQDGV
WASLPLADVL SFIVTLLFIR RFLKYYRLKN RHYLVPGTGK A