| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1813 |
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| Symbol | |
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| ID | 6274489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2199958 |
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| End bp | 2201343 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613877 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001878412 |
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| Protein GI | 187736300 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000145997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.0820418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCC AGTCACGCAA CATCGCAGAA TTGGAAAACG CATCCGTATG GCGTCTGCTG
ATCCAGTACT CCCTGCCCTC CATCGCCGGC ATGGTGGTAT ACTCCCTGTA CAACATCATT
GACAGCGTGT TTATCGGTCA CGGCGTGGGG CCTCTGGCCC TGTCCGGCCT GGCCGTCACC
TTCCCCATCA TGAACCTGAC TTTCGCCCTG GGCACGCTGG TAGGCATCGG CGGGGCGGCC
ATCAGCTCCA TCCGGCTGGG AAGAAAAGAC CAGGAAGGAA CTGAGCGTAC GCTTGGCAAC
GTCCTCATCA TGAGTCTGAT TGCCGCTGTG GTGCTGGTGA TTCCCACGCT TCTTTTCCTT
ACGGAAATCC TGACCGCCTT CGGCGCCAGC GGGCAAACCC TCACCTATGC GTACGACTTC
ATGCTTATTA CCTTGCTGGG CCTGCCCGTC ACGTACGTCT TCTTCAACCT CAATCATGTG
ATGAGAGCTA CCGGCTACCC TAAAAAAGCC ATGGGCTCCA CCCTTCTTTC CGTAGGAATC
AACATCATTC TGGCTCCCAT CTTCATCTTC TGGTTCAAAT GGGGCATTAC CGGAGCAGCC
GTGGCCACCC TTCTCGCCCA GGTCGTCGGC ATGGTGCGCG TGCTGTTACA CTTTTCCGAT
GCGGCCAGCA CGGTCCACTT CCGCCGCGGC ATCTGGCAGC TGCGCAAGAC CATCGTCACC
GGCATCCTGT CCATCGGGAT GGCTCCCTGC CTGGTAAACG TCTGCGGCAG CGCGGTCACC
GTCGCCATCA ACAGGCAACT TGCGGATCAC GGGGGGGACC TGGCCATCGG GGCCTACGGC
ATCATCAACC GCATTCTTAT TCTGTTCGCC ATGCTCGTCA TCGGCCTCAC TCAGGGAATG
CAGCCCATCA TCGGCTACAA CCACGGAGCC ATGAAGCCGG GCCGCGTTCT GCTCACCCTT
AAATACGGAG TTCTGGCAGG GACATCCTTC ACCACGCTGG GATTCCTGGC CTGCGTCTTC
TTTCCCCGCG GCATTGCCGG GCTCTTCACG GATGACGCCT CGCTCATCAG CCTGGCGGCC
AACGGTCTGA TCATCTGCGT GCTGGCCTTT CCGCTCATCG GCAGCCAGAT CATCATCGGG
AACTTCTTCC AGGCCATTGG AAAAGCCCGT CTGGCAATCT TCCTGTCCCT GACGCGCCAA
ATGCTCTTCC TCCTGCCGTT CCTGCTGGTC CTGCCCCGTT TCTGGGGACA GGACGGAGTC
TGGGCATCCC TTCCTCTGGC AGACGTGCTT TCCTTTATCG TCACCCTGCT CTTCATCCGC
CGGTTCCTGA AATACTACCG GCTGAAAAAC AGGCACTACC TGGTTCCCGG CACGGGAAAG
GCATAA
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| Protein sequence | MAAQSRNIAE LENASVWRLL IQYSLPSIAG MVVYSLYNII DSVFIGHGVG PLALSGLAVT
FPIMNLTFAL GTLVGIGGAA ISSIRLGRKD QEGTERTLGN VLIMSLIAAV VLVIPTLLFL
TEILTAFGAS GQTLTYAYDF MLITLLGLPV TYVFFNLNHV MRATGYPKKA MGSTLLSVGI
NIILAPIFIF WFKWGITGAA VATLLAQVVG MVRVLLHFSD AASTVHFRRG IWQLRKTIVT
GILSIGMAPC LVNVCGSAVT VAINRQLADH GGDLAIGAYG IINRILILFA MLVIGLTQGM
QPIIGYNHGA MKPGRVLLTL KYGVLAGTSF TTLGFLACVF FPRGIAGLFT DDASLISLAA
NGLIICVLAF PLIGSQIIIG NFFQAIGKAR LAIFLSLTRQ MLFLLPFLLV LPRFWGQDGV
WASLPLADVL SFIVTLLFIR RFLKYYRLKN RHYLVPGTGK A
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