Gene Amuc_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1809 
Symbol 
ID6275073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2196203 
End bp2196760 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content49% 
IMG OID642613873 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_001878408 
Protein GI187736296 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.664147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0637003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TATTGATTAT CAGCGGCCAT ACAAACCTTG CCGCATCTGT AGCCAATAAG 
ACAATCCTTG AAACCTTGAA CGAGCGGCTG CCGGAAGCTG AACTCGTAAA GCTTGACGAA
CTTTATCCCG ATTTCAAGAT CGACGTGGAA GCCGAACAAC AGAAATTGCT GTGGGCAGAC
ATCATTGTAT TGCAATTCCC TCTCTTTTGG TACTCCGCAC CCTCCATATT GGAACGCTGG
ATGGAAGAAA CTTTTCGTCA CGGCTTTTCA CACGGCAGTA CCGGAGACAA GCTCAAGGGC
AAGAAACTCA TTCTCTCTTT CACAACGGGA GCGCCCGAAA CGCTGTATAG CCGTGAAGGG
GCCATGGGCT ACGCGATTGA TGAATTTCTG CCATGCTACA AGGCTGTCTG CCGACTGACT
CAAATGGAAT ACTGCGGCAG TGTTTATACC TGCGGCATAA GTTACGGCAA TCGTACGACA
CCGGAACTTA TCGAGCAGCA AAAGGGAGCA TCGGTGGAAC ACGCTGAACG TCTTATCCGG
TTACTTGAAG CGCTCTGA
 
Protein sequence
MKNILIISGH TNLAASVANK TILETLNERL PEAELVKLDE LYPDFKIDVE AEQQKLLWAD 
IIVLQFPLFW YSAPSILERW MEETFRHGFS HGSTGDKLKG KKLILSFTTG APETLYSREG
AMGYAIDEFL PCYKAVCRLT QMEYCGSVYT CGISYGNRTT PELIEQQKGA SVEHAERLIR
LLEAL