Gene Amuc_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1794 
Symbol 
ID6275728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2181989 
End bp2182795 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content56% 
IMG OID642613858 
Productpeptidase S24 and S26 domain protein 
Protein accessionYP_001878393 
Protein GI187736281 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.854647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.00408927 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACACCGA CAAAAGGGGA TGTGAAACAC TGGTTGAAGG CCATTGGGAA AAACCGTGAC 
TGGCTTGCCA TGGAATGCGG TACGGAAAAA GGTACGGTGA ATAACTGGCT CTCCCCCTCC
GGCCCCTTCC CCGCCAGCGC CATGTTGAAA ATCCAATCCC TGATGTCTCA ATACAAAACG
GTTCGACCGG AAGACGAACC TGTCCAGACC AATCGCCTCG TGCTGGAAAT CACGGAAGAG
CGCATGAGGA AATATGAACG GGCCGCCTCT GAAAAAGGCG TCCCCCTCCG CCAGTGGCTG
ACGGATTTGG CAGACGAAGC GGCGGAGGAA CGCCAGCTGC GGCCAATGCA CTCTCCCCTG
GTTCCCCTGG TCAGACAATT TCCGTCCCAT GCTGGACACG CCAGGCGTGA ATACAGTACG
CAAATAATCG GCAACATCGC CGCAGGCTCT CTTGCGGAAA GCGACACCGT CCCGTCTACC
ATTTACATGG AAAGGCCCCT GGGTAAAAAC GAATACGTGG TCCGCGTAGA AGGGAAATCC
ATGGAACCCC TCATCCCGGA CGGCTCCCTG GTAATTATGC GGCGCCATAC CGCCCCGCCC
ATCCCCAAAC CGGGAACCAT CGTGGAATAC AACGACGGAC GCGGCGTTAC GCTGAAAAAA
CTGATTCGCA GGAAAAACGC GGAAACAGGA AAAACGGAAT ACGTGCTGCA GCCCATCAAC
CCCGCATTCA AGGACATAAC CCCCATGGAC GGCGGCAGTA TCTCCGGAAT ATATATGGAA
ACCCTTGTAA ACTACCGCAA AGGCTGA
 
Protein sequence
MTPTKGDVKH WLKAIGKNRD WLAMECGTEK GTVNNWLSPS GPFPASAMLK IQSLMSQYKT 
VRPEDEPVQT NRLVLEITEE RMRKYERAAS EKGVPLRQWL TDLADEAAEE RQLRPMHSPL
VPLVRQFPSH AGHARREYST QIIGNIAAGS LAESDTVPST IYMERPLGKN EYVVRVEGKS
MEPLIPDGSL VIMRRHTAPP IPKPGTIVEY NDGRGVTLKK LIRRKNAETG KTEYVLQPIN
PAFKDITPMD GGSISGIYME TLVNYRKG