Gene Amuc_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1793 
Symbol 
ID6274490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2180400 
End bp2181581 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content53% 
IMG OID642613857 
Productacyltransferase 3 
Protein accessionYP_001878392 
Protein GI187736280 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.130977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.00741592 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGAAAA CGCAGCATTC TCCCATTCCC CCAGGCAGTG AAAAACACCA CTACCACATA 
CTTGACGGTT TGCGCGGCGT AGCCGCCATT GTCGTCGTAT GGTTCCACAT CTTTGAAGCC
TACGCCACCA GCCATGTGGA CCAAATCATC AACCACGGCT ACCTGGCCGT CGATTTTTTC
TTCATGCTTT CCGGCTTTGT CATCGGCTAC GCCTATGACA ACCGCTGGAA AACGATGACG
ACCAGGGAAT TCATCAAACG CCGCCTTATA CGCCTGCAGC CCATGGTAGC GATAGGGGCG
CTCATCGGCG CGCTTATCTT CTATTTCCAG GGCTGCCCCG TATGGGATGT ATCGCAGGTA
GCGGTCATCT CCCTGTTCGC CGCTACCTTC GTCAATATTC TGCTCATTCC GTCTCCCCCC
GGCATGGAAA TCCGGGGTCT GGGAGAAATG TACCCGCTCA ACGGCCCGAG CTGGTCCCTG
TTCTTTGAAT ACATCGGCAA CCTTCTTTAT GCCCTCTTCA TCCGGAAACT CTCTACACGC
TCCCTGGCAA TACTGGTTGT CTCGGCCGGG TGCGGCCTTG CCTCCTTCAG CTTCTGGGGG
CCTAACGGAG ACATATGCTC CGGATTCTCC ATGACCGGCA CGGAATGGAC GGGCGGCTCC
CTGCGCCTGT TGTACTCCTT TTCAGCCGGT CTGCTCCTGT TCCGGCTGTT CAAGCCGCTC
AACGTCAAAA ATTCTTTCTG GTTATGCAGT CTGTCCCTTG CCATTCTGCT GGCCGTTCCC
CGGCTGGGAG GACAAAATGC TTTCTGGATG AACAGCCTCT ATGAAACAGC GTGCTTCACG
GTATTTTTCC CGCTCATCCT CCTCTTTGGC GCTTCCGGCA AAATTACAAA TCCCTATACG
GATAAAATAT GCCGTTTCCT GGGCAACATC TCCTACCCCC TGTACATGGT GCATTACCCG
TTCATCTACT TGTACTATGC GTGGGTGAAA AACGAAAAGC TTTCCTTCCT GGACTCACTT
CCCGGAGCCC TGGCCGTCGT CATTGGAAGC ATTCTGCTGG CCTGGCTCTG CCTGAAACTC
TATGATGAAC CGGTCCGTAA ATATTTGACA GCGCTTTTTT TAAAAAGAAA AGTCCTTCCA
AGGGAAACTC CCGTCATTCA GGAAAGCGGA CTTCCGCAAT AA
 
Protein sequence
MLKTQHSPIP PGSEKHHYHI LDGLRGVAAI VVVWFHIFEA YATSHVDQII NHGYLAVDFF 
FMLSGFVIGY AYDNRWKTMT TREFIKRRLI RLQPMVAIGA LIGALIFYFQ GCPVWDVSQV
AVISLFAATF VNILLIPSPP GMEIRGLGEM YPLNGPSWSL FFEYIGNLLY ALFIRKLSTR
SLAILVVSAG CGLASFSFWG PNGDICSGFS MTGTEWTGGS LRLLYSFSAG LLLFRLFKPL
NVKNSFWLCS LSLAILLAVP RLGGQNAFWM NSLYETACFT VFFPLILLFG ASGKITNPYT
DKICRFLGNI SYPLYMVHYP FIYLYYAWVK NEKLSFLDSL PGALAVVIGS ILLAWLCLKL
YDEPVRKYLT ALFLKRKVLP RETPVIQESG LPQ