| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1783 |
|---|
| Symbol | |
|---|
| ID | 6275630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 2171867 |
|---|
| End bp | 2172160 |
|---|
| Gene Length | 294 bp |
|---|
| Protein Length | 97 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642613846 |
|---|
| Product | glutamyl-tRNA(Gln) amidotransferase, C subunit |
|---|
| Protein accession | YP_001878382 |
|---|
| Protein GI | 187736270 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
|---|
| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.430595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.0777818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC CCCAAATAGA CGTAGCCTAC ATTGCCAAGC TGGCACGCAT TGACCTGACG
GAGGAAGAAA CAGCTCTCTT CTCCAAGGAT CTGGACAAAG TCCTGGCCTA TATCACCAAG
CTGGAATCCT ACGATGTCAC GGGCATCGCC CCCATGAACC ATCCTCTCCC GGCAATGGAC
GTGATGCGCG AAGACATTCC TGAAACCGGC TTCACCCAGG AAGAAGCCCT CTCCAATGCC
CCCCAGCAGT CCCAGGGGCA ATTCCGCACG CCCAAGGTGG TGGAATCCGC CTGA
|
|---|
| Protein sequence | MSTPQIDVAY IAKLARIDLT EEETALFSKD LDKVLAYITK LESYDVTGIA PMNHPLPAMD
VMREDIPETG FTQEEALSNA PQQSQGQFRT PKVVESA
|
|---|
| |