Gene Amuc_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1773 
Symbol 
ID6274868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand+ 
Start bp2158076 
End bp2158738 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content56% 
IMG OID642613836 
Productprotein of unknown function DUF218 
Protein accessionYP_001878372 
Protein GI187736260 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.185676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.489345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCAG AGGAAGCCAT AGCAATTTTA TGGGATTACC ATCACGTGAA GCAGGAACTG 
CGTCCGGCGG AACTCATATT CATTCTTGGT AGCAATGACA TAAGGGTGGC GGAATATGCG 
GCGGAACTTT ATGCCCGGAA GCTGGCTCCC CTGTTGCTGT TTTCCGGCGG AATGGGGCGT 
TTTACAGGGG AATGGGCCGT ACCGGAAGCG GAACTTTTCG CAGAGGCGGC TATGAAAAAG 
GGAGTGCCGG GAGACTGCAT TCTCATTGAA AACAAATCCA CCAATACGGG AGAAAATGTC 
CGCTTTTCCC GTGCTGTCCT GGAAAAAGCC GGCATCCCGG AACCATCCAG CATCATCGCC 
CTTCAAAAGC CCTATATGGA ACGGCGCACG CTGGCTACGC TCCAGGCCCA GTGGCCGGAA 
GTACGGGTGG CGGTCAGCTC CCCTCCTTTC TCGTTCAGGG AATATCTGAC CAGGGAGCTC 
CCGCAGGATC TGGTTGTTTC CGCCATGGTG GGGGACTTTC AAAGGATACT GGAATATCCT 
AAACAGGGAT TTTCCACGGA ACAGCCTGTG CCTCCGGAGG CGATGGCGGC ATTCCGCACG 
CTGGTGGAAG CGGGGTATGG CTCCCAGCTG CTCAAGGGTG TCCCCCTTCC TTGGAATTCT 
TGA
 
Protein sequence
MTPEEAIAIL WDYHHVKQEL RPAELIFILG SNDIRVAEYA AELYARKLAP LLLFSGGMGR 
FTGEWAVPEA ELFAEAAMKK GVPGDCILIE NKSTNTGENV RFSRAVLEKA GIPEPSSIIA 
LQKPYMERRT LATLQAQWPE VRVAVSSPPF SFREYLTREL PQDLVVSAMV GDFQRILEYP 
KQGFSTEQPV PPEAMAAFRT LVEAGYGSQL LKGVPLPWNS