| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1754 |
|---|
| Symbol | |
|---|
| ID | 6275012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 2135706 |
|---|
| End bp | 2136623 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642613817 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | YP_001878353 |
|---|
| Protein GI | 187736241 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACC TCCTTTCCAT CGAACAGCTT ACCGGAGACG AAATCCGGGA CCTGCTCGCC
CTGGGCCACC GGCTTAAGGC GGAACGCGGC CATCACGAAC GCCTTCCCCT GAAGGGGCAG
ACCTGGGCGC TCATCTTTTC CAAATCCTCC ACCCGCACCC GCGTTTCCTT TGAAGTGGGC
ATCAGTGAAC TGGGGGGCCG TCCCATGTTC CTTTCCGTCC ATGACATCCA GCTCGGGCGT
GGAGAGCCCA TCAAGGATAC GGCCCGCGTG CTGGGACGTA TGATCCACGG CGCCGCCATC
CGGACTTACG GACAGCAGGA GGTGGAGGAA TTCGCCAGCT TTTCCGGCAT TCCCACCATC
AATGCCCTGA CGGACGAGGA GCACCCCTGC CAGATCCTGG CGGACCTGCT TACCATTGAG
GAAATCTACG GCCCCGGTTC CTGGAAGGAT ATGAAAATCG CCTTCGTGGG GGACGGGGAC
AACAACATGT CCCGCTCTTG GATGTGGGCG GCCAAGAGGC TGGGCTTTAC GCTCGCCATC
GGAGCCCCTA CCAATTACCT TCCCCTGGAA GACTTCCGCA GGCATCTGGA CTGCGAGAAC
GTCATCTTCA CCACGGACCC CGTGGAAGCC GTCAAGGGAG CTTCCGTCAT CAACACGGAT
GTCTGGCTTT CCATGGGCCA GGAATCGGAA GGACTGTCCA AGGAAAAACA CTTCTACCCC
TACCAGGTGA ACAGGGAGCT GCTGGAACAT GCCGCCTCCG GCCACTCCGT TTTCCACTGC
CTGCCCGCCT ACCGCGGCAA GGAAATCACG GAAGACGTGC TGGAACATTT TGCTCCCGTT
ATCTTCCGGG AAGCGGAAAA CAGGGTGCAT GCCCAGAAAG CCGTGCTCGC CACGCTTGCA
GACGCCCGCC GGGGATAA
|
|---|
| Protein sequence | MNNLLSIEQL TGDEIRDLLA LGHRLKAERG HHERLPLKGQ TWALIFSKSS TRTRVSFEVG
ISELGGRPMF LSVHDIQLGR GEPIKDTARV LGRMIHGAAI RTYGQQEVEE FASFSGIPTI
NALTDEEHPC QILADLLTIE EIYGPGSWKD MKIAFVGDGD NNMSRSWMWA AKRLGFTLAI
GAPTNYLPLE DFRRHLDCEN VIFTTDPVEA VKGASVINTD VWLSMGQESE GLSKEKHFYP
YQVNRELLEH AASGHSVFHC LPAYRGKEIT EDVLEHFAPV IFREAENRVH AQKAVLATLA
DARRG
|
|---|
| |