| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1748 |
|---|
| Symbol | |
|---|
| ID | 6275635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 2128217 |
|---|
| End bp | 2129266 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642613811 |
|---|
| Product | NAD/NADP octopine/nopaline dehydrogenase |
|---|
| Protein accession | YP_001878347 |
|---|
| Protein GI | 187736235 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAA TTTCCACTCC TGTCATAGGC ATTTGCGGCG GCGGCAACCT GGCCCATGCC
ATGGCGGGAT GGCTGGGTAC ACGCGGCCTA CATGTCAATA TCCTAACCCG AAACCCTAAT
CAATGGGGAA AAAGTCTCTC CGCTATCTTT CCAAACGGTA CTACGCACCA TGCTCCCCTA
GGGCATATCA GCAACCATCC GGAAACATTG AAAGACTGCA ACCTTGTGCT GGTGGCGGTT
CCCCGCTTTG GCATTCGGGA GGTATGCCAC CGCATTAAAC CCTATCTGCA TCGAGAACAG
GGGCTCGTTA TTGTACCCGG TACTCCGGAG GTCATGGAGA TGGCAGAAGA TCCCTCTTGG
ACTTCCACCG TCAGCCTGAT GGGAATATAC AAGGTTCCCC TGATTTGTCG GACGCAGGAA
TATGGACATT CCGTCTCCAT TCTCGGAAGC CGCCCTCTTA ACAGGATATG GGTAGCCCCA
GGAAATAATG CCGAACATTG GTCCGCCATG TTGGAAACCT TATTTGACAC TCCTCTGACT
CATCTTTCTT CTCCCTGGCC CTTTCTGTTG ACCAACTCCA ACCCCCTTCT CCACCCTTCC
CGCTGCATGA GTCTGTTTCG CCACTACAGG GAAGGAACGT TTTATGACAA GCAGTTTCTT
TTTTATGAAG AATGGACGGA GGAGGCCAGT GAGTTGTACA TCCAGGCAGA TAGAGAACTT
CTGACCCTCT GTTCCTGTTG TCCCGGCATG GAAATCGGAA AGGACATCAT TCCCGTCCTA
GATTATTATG AATCCAGAAA TGCCGTAGAG TTGACTAAAA AGATTCAATC TATTCCGGCA
TTCCATGGGG TTAAAGCTCC CATGACCCGC CGGAAACAAG GATGGATTCC CGATTTTTCT
TCCCGTTACT TTACGGAAGA TGTTCCTCTG GGCACCAAAC CCATTTGCTA TCTGGCGGAG
CAATTAAACA TTCCGGTTCC TACACTCCAG TCCTTTGTGG AATGGAACAC CTCCATACTG
AACAGATTCT CCCCATTTCG GAAGAAATAA
|
|---|
| Protein sequence | MNTISTPVIG ICGGGNLAHA MAGWLGTRGL HVNILTRNPN QWGKSLSAIF PNGTTHHAPL
GHISNHPETL KDCNLVLVAV PRFGIREVCH RIKPYLHREQ GLVIVPGTPE VMEMAEDPSW
TSTVSLMGIY KVPLICRTQE YGHSVSILGS RPLNRIWVAP GNNAEHWSAM LETLFDTPLT
HLSSPWPFLL TNSNPLLHPS RCMSLFRHYR EGTFYDKQFL FYEEWTEEAS ELYIQADREL
LTLCSCCPGM EIGKDIIPVL DYYESRNAVE LTKKIQSIPA FHGVKAPMTR RKQGWIPDFS
SRYFTEDVPL GTKPICYLAE QLNIPVPTLQ SFVEWNTSIL NRFSPFRKK
|
|---|
| |