| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1746 |
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| Symbol | |
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| ID | 6274668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2125808 |
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| End bp | 2126767 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642613809 |
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| Product | LicD family protein |
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| Protein accession | YP_001878345 |
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| Protein GI | 187736233 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3475] LPS biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAA TAAGCCATAT AAAATATATG GTGCTTTGCA ATCTTCCCTA CCGTTTGCGG
GAAATCGCCG GACGGATTGC GAAGAAATGC AGGAGAAGGA AAGACCGGTC TCTTGAAGCG
AAGCTGGAGG ATATTCGCAA TTTGCTTATT TATAACCACC CTATTTCCTC AGTTCCCCCG
GCGACGGGGA AGTTGAGGCT CCTTCAGGAC GGCAATACGG TTTTGCTGGC CCTTTTTGCG
CGCAAATGCC GGGAAAACGG ACTGCGGTAC TGGCTGGATT ACGGCACTTT GCTGGGGGCG
GTAAGGCACA GGGGCTTTAT TCCGTGGGAT GATGATCTGG ATGTGAGCAT GATGAGGCCG
GAGTTCGACC GCCTGCTGGA ACTGCTTCCC GTTCTTTTCC CCCGTGAGGA AGGATTTACC
TGGAACAGGC ACGCCTTTCT GCAAATAGGA TATGAGGGCA CCCCCCTCAA CCTTGATGTG
TATCCCTATC ATTTTTATGC AGAGAGTCTT TCATCTCCGG AACAGCATGA AAAGCTGGAC
AGGCTTTTGA GCGGATTTAA GAAAGACGTG GTGCTGGTAG GTTCCAGGAT GAACCTGACC
GATGGGCAGG TTCAGGAGAA AATCCGCCAG GATATTCTGG AAGGAAGGGA TGCTGCCGGG
GAAGATGAAG CCCCCGGGAT TTTTCTTTCT CCTGCCATTA CGTTTACAAA AAACACGCAC
CTTTCCTATG AAACGTTCTT TCCCCTTGGC TCCGCAGAAT TTGAGGGGAT AATATTTTCC
GTGCCCAACC ATGCCCGCCA GTACCTGCAA TTTTTTTACG GCGACTATCT GTCTTATCCG
GAACGCATCC AGTTCAAGCA TCCTTCCGTG AAGGCCATGG TGGAGAAGGT TCCCTTTGAG
GCGGCGGTCA ACCGTTTCAT TGACGTTTAC GGAAAGCGGA TTGATGCGCT CATGCCATGA
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| Protein sequence | MSKISHIKYM VLCNLPYRLR EIAGRIAKKC RRRKDRSLEA KLEDIRNLLI YNHPISSVPP
ATGKLRLLQD GNTVLLALFA RKCRENGLRY WLDYGTLLGA VRHRGFIPWD DDLDVSMMRP
EFDRLLELLP VLFPREEGFT WNRHAFLQIG YEGTPLNLDV YPYHFYAESL SSPEQHEKLD
RLLSGFKKDV VLVGSRMNLT DGQVQEKIRQ DILEGRDAAG EDEAPGIFLS PAITFTKNTH
LSYETFFPLG SAEFEGIIFS VPNHARQYLQ FFYGDYLSYP ERIQFKHPSV KAMVEKVPFE
AAVNRFIDVY GKRIDALMP
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