| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1714 |
|---|
| Symbol | |
|---|
| ID | 6275758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2082977 |
|---|
| End bp | 2084275 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642613777 |
|---|
| Product | Histidinol dehydrogenase |
|---|
| Protein accession | YP_001878313 |
|---|
| Protein GI | 187736201 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000013465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000000000040894 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT ACCGTCCTTC CGATACCTGC TTTGACGAGA TGAAGCGCCG GATGAACCGC
CGCGCACTCC CGGAGGATTC CGTAAGGGAT ACCGTGAACG CTATTATCCG GGATGTTTCC
GTGCGCGGAG ATGAAGCCCT GTTTGATTAT GCCGCCAGAT TTGACAAGGC GCATCTGGAT
TCTTCCTCCC TGTTCGTAAC GGAGGCAGAA CTGGCGGAAG CGGAGGCCAT GGTGGAGGAG
TCTGTGAAGG AGGCCATTGC CGTTTCTCTG GCAAACATCC ATTATTTTTC AGACCGCAGC
CGCAGGCGGG ACTGGTCCGG CGTGAATGCG CAGGGCGTGG AGGTAGCGGA GCGGTTCCTT
CCGTACGACC GTGTGGGCAT TTATATCCCC GGAGGAAAGG CTCCCCTGGT ATCTACTTCC
ATCATGACGG GCGGTTTTGC TCAGGCCGCC GGCGTGCGGG AGATTGTGGC CGCCACGCCC
TGCGGGCCGG ACGGCCGGGT GAATCCCGCG CTTTTGTATG CGCTGAAAGC CTCCGGCGCA
ACGGAGATTG TCAAGATAGG GGGAGCCCAG GCGATAGCCG CCCTTGCGCT GGGGACGGAG
AGCGTGAGAC CGGTGGAGAA GATTTTTGGC CCCGGCAACC GTTTTGTGGT GGAGGCCAAG
CGTCAGTTGG TGGGGGCCGT TGCCATTGAT TTGCTGCCCG GCCCCAGTGA AGTAATGGTG
CTGGCAGATG ATACTGCGGA TGCGGAGTTC CTTGCTGCCG ACCTGCTGGC GCAGGGCGAG
CATGGCCCGG ACAGCGTAGT TGTTTTTGTC ACCACATCGA AAGCGTTATT GGAGCAGGTG
GAGGCGGAAG TGGAACGCCA GGCCGCCCTG CTGAGCCGCG GGTCCATCAT CCGGGAGGTG
CTGGACAAGC ATGCCTACGG TTTTCTGGTT TCTTCCATTC AGGAAGGGGT GGAACTGGTT
AATGCTTTTG CGCCGGAACA TTTGGTGCTC GTCACGAGGG ATGAAGAAGC CGTGCTGAAT
GGCATCAGGA CGGCGGGAGC CATTTACGCA GGCTCCCTTT CTACTGTAGC CTGCGGGGAT
TTTCTGGCGG GTCCCAGCCA TACGCTGCCT ACCGGCGGCG CCGGCAAGTC TTTTTCCGGC
TTGCGGGCGG ATCAGTTCCA GCGCCGCACC AGCGTGGTGC GCATGGACCG GAATGCCGTG
CTGAACTCCG CCCCGTATGT GGCAGAGTTC GCCCGGGTGG AGGGGCTGGA CGCCCACAAC
CACTCCATTC AGGTTCGCGC CGCCCGTGTG GACCGGTAA
|
|---|
| Protein sequence | MKIYRPSDTC FDEMKRRMNR RALPEDSVRD TVNAIIRDVS VRGDEALFDY AARFDKAHLD
SSSLFVTEAE LAEAEAMVEE SVKEAIAVSL ANIHYFSDRS RRRDWSGVNA QGVEVAERFL
PYDRVGIYIP GGKAPLVSTS IMTGGFAQAA GVREIVAATP CGPDGRVNPA LLYALKASGA
TEIVKIGGAQ AIAALALGTE SVRPVEKIFG PGNRFVVEAK RQLVGAVAID LLPGPSEVMV
LADDTADAEF LAADLLAQGE HGPDSVVVFV TTSKALLEQV EAEVERQAAL LSRGSIIREV
LDKHAYGFLV SSIQEGVELV NAFAPEHLVL VTRDEEAVLN GIRTAGAIYA GSLSTVACGD
FLAGPSHTLP TGGAGKSFSG LRADQFQRRT SVVRMDRNAV LNSAPYVAEF ARVEGLDAHN
HSIQVRAARV DR
|
|---|
| |