| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1669 |
|---|
| Symbol | |
|---|
| ID | 6274577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2021876 |
|---|
| End bp | 2023519 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642613727 |
|---|
| Product | Beta-N-acetylhexosaminidase |
|---|
| Protein accession | YP_001878268 |
|---|
| Protein GI | 187736156 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.254995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.452028 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTCA GACATGTTTC CCATGTGTTT CTTTTTCTGT TTTCCGGCTT ATGCGGCACG
GCCGTGAATG CTCAGGATCA GATAATACCC CGGCCCGTGT CCGTGAAGGT AGAGGCCAAG
GGGGCGGCAA CGCCCGTGAA GCTGGGTGAA GGAATGCGCA TTATATGCAA GGAGAAGGAC
GGGGAGTTCC GGCGCCAGGC TCACTTGTTG CAGCAGTTTT TGTCACGCGG AACCGGATTG
GCTCTGGACG GGGCTGGCGG TACGGGAATA ATCCGCGTTG TGAAGGACGC TGCCCTGAAG
CAGTACGGGC CGGAGGCATA CCGTTTGGAA GCGGCTCCCG GAAATATCGT CATCAGCGCC
GCGACTCCCA AAGGAGTTTA TTATGCGGGG CAAAGTCTGG CGCAGATGCT GCCTGCCGCC
TTTTTCAACA ATGATGCGGA CAAAAAGAGC GTAAGTTGGA ATGTAGCGGA GAAGCCTTTT
TCCATATTGG ATTATCCCCG TTTTGCCTGG CGAGCCTTCA TGCTGGATGA AGCACGGCAT
TTTTTTGGAG AGGAGGAGGT GAAGAGGCTG ATTGACCAAA TGGGGCTCCT GAAAATGAAT
GTCCTGCACT GGCATTTGTC GGATGATGCC GGATGGCGCA TCCAGATTAA AAAATATCCC
AAACTGACAT CCGTGGGAGG CAAGAGGAGA GATACGGAGA TAGAGACGTG GGGAAGCGGC
AAGTATGAAG GCAGGCCCCA TGAAGGCTTT TATACGCAGG AACAGGTCAG GCGCATTGTC
CGGTATGCGG CCGACAGGAA TATAACGATT GTTCCTGAAA TAGATATTCC GGGCCATTCC
GCCGCCGCCA TCGTTTCCTA TCCGGAGTTG AAATTGTCCG CCAGGCCTTT CGCGGAAGTG
CCCGTGAGTT TCAATGACGG AGCGGCGTTT GATCCCACCA GCGAACGTAC CTACCAGTTC
CTGGGAGACA TCATGACAGA GCTGGCTTCC CTCTTTCCCG GAGGTATCAT TCACATCGGC
GGTGACGAGG TGCGGTACAA AAAGTACTGG GAAGGCGTGC CCCACATTGA GGCGTTCATG
AAGAAAAAAG GCATTAAGAC TTTTCCCGAC CTTCAAATCA TGTTTACGAA TCGGATTTCC
GGCATGCTGG CTGGGATGGG GCGCCGGATG ATGGGGTGGA ATGAAATACT GGGGTCCGAC
GTGCACAATG ACGGCGGCCG GGGAGCTGCG CTCGGCAAGC TGGATGCAAA TGCTATCATT
CATTTCTGGT ATGGGTCCGA TAAAATTGCC GCCAAGGCGA TCAGGGAAGG CCGCCAGGTG
GTGAATTCCA CTTCCCACAT GACTTACATT AACAAAGGAT ATGACAAGCT CCCTCTGTCC
AGGTCCTATT CTTTTGAGCC CGTTTTTGCG GGATTGAACC CGGAGCAGCA GAAGAATGTC
ATCGGGCTGG GCTGCCAGGT CTGGACGGAA TGGATTGCGG ACGTGGAGAA ACTGCACCGT
CATGTATTTC CCCGTATTGC CGCTTATGCG GAGACGGGGT GGACCCGGAA GGAGGATAAG
AATTTTCAGG ATTTCCAGAG GCGTTTGACG GGGTATGAAA AAATTTTGGA TGCCCAGGGC
ATCCGGCACG GTGAAAAGGA GTAG
|
|---|
| Protein sequence | MMFRHVSHVF LFLFSGLCGT AVNAQDQIIP RPVSVKVEAK GAATPVKLGE GMRIICKEKD
GEFRRQAHLL QQFLSRGTGL ALDGAGGTGI IRVVKDAALK QYGPEAYRLE AAPGNIVISA
ATPKGVYYAG QSLAQMLPAA FFNNDADKKS VSWNVAEKPF SILDYPRFAW RAFMLDEARH
FFGEEEVKRL IDQMGLLKMN VLHWHLSDDA GWRIQIKKYP KLTSVGGKRR DTEIETWGSG
KYEGRPHEGF YTQEQVRRIV RYAADRNITI VPEIDIPGHS AAAIVSYPEL KLSARPFAEV
PVSFNDGAAF DPTSERTYQF LGDIMTELAS LFPGGIIHIG GDEVRYKKYW EGVPHIEAFM
KKKGIKTFPD LQIMFTNRIS GMLAGMGRRM MGWNEILGSD VHNDGGRGAA LGKLDANAII
HFWYGSDKIA AKAIREGRQV VNSTSHMTYI NKGYDKLPLS RSYSFEPVFA GLNPEQQKNV
IGLGCQVWTE WIADVEKLHR HVFPRIAAYA ETGWTRKEDK NFQDFQRRLT GYEKILDAQG
IRHGEKE
|
|---|
| |