| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1643 |
|---|
| Symbol | |
|---|
| ID | 6275685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 1985918 |
|---|
| End bp | 1986775 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642613703 |
|---|
| Product | diacylglycerol kinase catalytic region |
|---|
| Protein accession | YP_001878244 |
|---|
| Protein GI | 187736132 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.356407 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC CCCTGTTTTT CAATAACACG GCGCGCAGCG CCAGATCCGG ACGATTCCGC
CGCTGGCTGG ATCGGCACCG GGATTTTTTT GACGTCATTG AACCGGAAAG CAGGGAAGAC
ATGTTGAACC ATTTGGTTTC TCAGGCTAAT TCCGGAGCGC CTGCCGTGGC TGTGGCTGGG
GGAGACGGCA CGCTGGGAAT CGCGGCAAGG GCCCTCTGCA ATACGGAAAC GGTGCTGGCC
CCCTTCCCTG CGGGTACCAT GAATGTTTTT TCACGGGAAA TAGGAATCCG CCCGGATTTC
GACCACGCCC TGCACATTCT GAACACGGGG CGTTCCAAAA ATGTGGACCT GTTCGCATTC
AACGGGCAAG TTTTTCTCCA AATGGCGGGC ATTGGCGCGG ATGCCCGAGC CGTAGAACTG
ACCACATGGG AAATGAAAAA AAAATGGAAA GCCCTTGCCT ACGTAATTGC CGGCGCCCGC
GTCTGTACGG AAAAACAGCC GCACCTCACC CTGACCACAG ATGAAGGCCG GGTATTGGAA
GGCCGCTTCA TCATCTTCGG CAATGGACGC AAGTATGGCG GGCCGCTTAA CTTCTTTGCT
GAAGCGGACA ACAGTGACGG CCTTCTGGAC GCAGTAGTAT TCAGGCATTC CATTACTTCC
ATCATCGGGG AATTCCTGAT GGCCGCAGTC CATGGGGGCT TTCATTCCCG GAGGAGCGGC
AGTTTTGAAT ACATCCGGAT GACGGGGGGA TCCGTCACCT CCGCCGGACA GGCCTCCTGC
GAACTGGACG GCGATTATGC AGGAAACGCT CCGGTCCGCA TTACCCGCCC CGGCTCGCTG
AAAGTGTTCG TCCCCTGA
|
|---|
| Protein sequence | MKIPLFFNNT ARSARSGRFR RWLDRHRDFF DVIEPESRED MLNHLVSQAN SGAPAVAVAG
GDGTLGIAAR ALCNTETVLA PFPAGTMNVF SREIGIRPDF DHALHILNTG RSKNVDLFAF
NGQVFLQMAG IGADARAVEL TTWEMKKKWK ALAYVIAGAR VCTEKQPHLT LTTDEGRVLE
GRFIIFGNGR KYGGPLNFFA EADNSDGLLD AVVFRHSITS IIGEFLMAAV HGGFHSRRSG
SFEYIRMTGG SVTSAGQASC ELDGDYAGNA PVRITRPGSL KVFVP
|
|---|
| |