| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1641 |
|---|
| Symbol | |
|---|
| ID | 6274645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 1984050 |
|---|
| End bp | 1984925 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642613701 |
|---|
| Product | Methenyltetrahydrofolate cyclohydrolase |
|---|
| Protein accession | YP_001878242 |
|---|
| Protein GI | 187736130 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 0.794405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCA TCGATGGAAA ACAAGTAGCT TCCCAGGTGC TGGAAGAGGT TGAAAGGGAT
ATTGCCCGGC TCAGGGAACA GGGAATAACG CCCGGCTTGG CCGTGGTTCT GGTAGGGGAA
GATCCCGCTT CCCAGGTATA TGTAAATTCC AAGGTGAAAA AGTGTGCGGA GCTGGGGATG
AATTCCCGTA AAATAGTTCT CCCTTCCGAC GCCTCCCAGG AAGAACTGCT CCGGATTGTC
CGTGAATTGA ACGTGGATCC TTCCGTCCAC GGCATACTGG TGCAAAGCCC GCCTCCCCCC
CATATCGACG AGGCGGCCGT GGTCCTGGAA ATAGACCCTG CCAAGGATGT GGACGGCTTC
CATCCGGAGA ATGTCGCCAA GCTGGTGCTG GAAGATGAGA CCGGTTTTGT ACCCTGTACC
CCTCTGGGCT GTATGAGGCT GTTAAAGGCC GCCGGCATTG AAACGGCGGG AGCGAATGCC
GTGGTCATTG GCCGCAGCAT GATTGTGGGC AAACCGATGG CGCATCTTTT GATGTCCAAA
CAGGCAAACG CTACCGTAAC CGTGGCTCAT TCCCGTACGA AAAACCTGCC GGAACTTTGC
CGTTCCGCTG ATATCATCGT GGCAGCCATA GGCCGGCCCG CTTTTGTGAC GGCTGATTTT
GTGAAAGACG GCGCCGTAGT GGTGGATGTG GGCATCAACC GCGTGGAAGA TGCCTCCGCC
AAGCGCGGCT ACCGGATTGT GGGAGACGTA GCCTATGACG AGGTGGCTCC CAAGTGCCGG
GCCATTACTC CCGTGCCCGG CGGCGTGGGG CCGATGACTA TCGCCATGTT GATGGCTAAT
ACGGTCAAAG CGTGCCGCCA GCAGACGGGA GCCTGA
|
|---|
| Protein sequence | MQIIDGKQVA SQVLEEVERD IARLREQGIT PGLAVVLVGE DPASQVYVNS KVKKCAELGM
NSRKIVLPSD ASQEELLRIV RELNVDPSVH GILVQSPPPP HIDEAAVVLE IDPAKDVDGF
HPENVAKLVL EDETGFVPCT PLGCMRLLKA AGIETAGANA VVIGRSMIVG KPMAHLLMSK
QANATVTVAH SRTKNLPELC RSADIIVAAI GRPAFVTADF VKDGAVVVDV GINRVEDASA
KRGYRIVGDV AYDEVAPKCR AITPVPGGVG PMTIAMLMAN TVKACRQQTG A
|
|---|
| |