| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1640 |
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| Symbol | |
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| ID | 6275735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1983349 |
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| End bp | 1984077 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642613700 |
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| Product | protein of unknown function DUF374 |
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| Protein accession | YP_001878241 |
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| Protein GI | 187736129 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2121] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.762508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCTGC TCAATCCTAT TGTTCGGAAA ACATCTGAAA AGCGTTCCCG CTGGTGGACC
AGGCTGGCCG GATTTGGCCT GTGGTCCGTA CTCCAGCCCA TTTGCATGAG CCTGAATATC
CGTTCCATCA AGGAGGAGCA TGATGATGTT TATACGGCGC CTTTTCTGGT AGCCCTTTGG
CACAACCGCA CGATGGTGCC GGGTTATGCG TGGTCCCTGG CCCAGAAGCC GCTCAAGATG
AGTGTGCTTA CCAGCGCCAG CAAGGACGGC GCCCTGGTGG AGGCCGTATG CAGGCATTTT
GGCCTGGGTG CCGTCCGGGG ATCTTCCGGA CGGCGGGGGG CTCTGGCCTA CATGGAAATG
ATGCGAAAGG TCCAGGAGGG GGACGTCTGC TTCTGTTTTA CTCCGGATGG TCCGCGAGGC
CCTATTTACG AAGTGCACCA CGGTATTGTC AAACTGGCCT CCCAGTCAGG GCTGCCCATC
GTTCCCGTAT GCATCGAATA TGAAAGCTGC TGGCGTTTGA ACAAGACCTG GGACCGCTAT
GCCATTCCCA AACCGTGTTC CAACGTAAAT ATTCTATGGA AAAAGCGCCT GTTCATTCCT
CCGGACGCGA CGGATGAACA GGTGGCGGAT TATGCCCGTC TTCTGGCCGG GCTGCTTGGC
GAGGGGCTTC CGGACTTCCC GCCTCTTAAC CAATCATTAT TATGCAAATC ATCGATGGAA
AACAAGTAG
|
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| Protein sequence | MLLLNPIVRK TSEKRSRWWT RLAGFGLWSV LQPICMSLNI RSIKEEHDDV YTAPFLVALW
HNRTMVPGYA WSLAQKPLKM SVLTSASKDG ALVEAVCRHF GLGAVRGSSG RRGALAYMEM
MRKVQEGDVC FCFTPDGPRG PIYEVHHGIV KLASQSGLPI VPVCIEYESC WRLNKTWDRY
AIPKPCSNVN ILWKKRLFIP PDATDEQVAD YARLLAGLLG EGLPDFPPLN QSLLCKSSME
NK
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