Gene Amuc_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1603 
Symbol 
ID6274451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1926953 
End bp1927837 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content52% 
IMG OID642613663 
Producthypothetical protein 
Protein accessionYP_001878204 
Protein GI187736092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.683974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.907504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTT TATCCTCCGC CGCCGTCATT TGCGCCGCCC TGTTCTCCGG AACCATCCTT 
CATGCGCAGG ACCCGGAACT GCTGGCCAAG CGCCAGTGCC GTTCCGTCCA TATCAACCAG
CAGGGGCATC CCTCCCAGGC AAGCGCCCTG TACAATGTAG TGAAAGCCAA AACATCCGTT
CCCGGCACCT ACTTTTGCGC CATGAATTTT GACGACGGCT ATATCGGTTT TCAGGAACAA
TCCAACGGTA AAAAAGTAAT CATCTTTTCC ATCTGGGATC CGGTGGCACA CGGAGACAAC
CCCAATGATG TGCCGGAAGA AGAACGCACC AAGCTGGTAA AACTGGGCAA AGATGCGCGC
TCCGGACGTT TTGGCGGTGA AGGAACAGGC GGACAAAGCT TCGTGGACTA TCCCTGGGCA
ATCGGGGAGA ACATGCGCTT CCTCGTCTGC GTCAAAAAAA TGGGGAAATT CAAGGAAATC
AGCGGTTATT ACTTTAATAA TAAAAGCAGG TCCTGGGATC TTATTTCCAA ATGGAAAACG
CATTCCTCGG AAAAGGAACT TTCCTTCTCC GTCGGATTCG TGGAAGATTT CATGCGTAAT
TTTGAATCAG CCAAGAAGGC CCGCGGAGCC TTCTTTGGCC CCAGCTTCGC GTACAAGGAC
GGCAAATGGC ATCCCAATAC CAGCGTAACG TTCACCGGCG ACCCAACCCC CTCCACCAAC
GTCATGGCGA ACATCCAGCC TGATGGTTCC GTGCTGCTTC AGACGGGGGG AACTACGAAA
ATGACGGATT TCAAGCTGTT CCAAAATCGT CCCCTGCCCC AGAATATCAA GCTGGTCCTG
CCTGACAAGG CCGTTACCAG TCTTGTTCAG GAGAACATTA ACTGA
 
Protein sequence
MRLLSSAAVI CAALFSGTIL HAQDPELLAK RQCRSVHINQ QGHPSQASAL YNVVKAKTSV 
PGTYFCAMNF DDGYIGFQEQ SNGKKVIIFS IWDPVAHGDN PNDVPEEERT KLVKLGKDAR
SGRFGGEGTG GQSFVDYPWA IGENMRFLVC VKKMGKFKEI SGYYFNNKSR SWDLISKWKT
HSSEKELSFS VGFVEDFMRN FESAKKARGA FFGPSFAYKD GKWHPNTSVT FTGDPTPSTN
VMANIQPDGS VLLQTGGTTK MTDFKLFQNR PLPQNIKLVL PDKAVTSLVQ ENIN