Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1603 |
Symbol | |
ID | 6274451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1926953 |
End bp | 1927837 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642613663 |
Product | hypothetical protein |
Protein accession | YP_001878204 |
Protein GI | 187736092 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.683974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.907504 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTCTTT TATCCTCCGC CGCCGTCATT TGCGCCGCCC TGTTCTCCGG AACCATCCTT CATGCGCAGG ACCCGGAACT GCTGGCCAAG CGCCAGTGCC GTTCCGTCCA TATCAACCAG CAGGGGCATC CCTCCCAGGC AAGCGCCCTG TACAATGTAG TGAAAGCCAA AACATCCGTT CCCGGCACCT ACTTTTGCGC CATGAATTTT GACGACGGCT ATATCGGTTT TCAGGAACAA TCCAACGGTA AAAAAGTAAT CATCTTTTCC ATCTGGGATC CGGTGGCACA CGGAGACAAC CCCAATGATG TGCCGGAAGA AGAACGCACC AAGCTGGTAA AACTGGGCAA AGATGCGCGC TCCGGACGTT TTGGCGGTGA AGGAACAGGC GGACAAAGCT TCGTGGACTA TCCCTGGGCA ATCGGGGAGA ACATGCGCTT CCTCGTCTGC GTCAAAAAAA TGGGGAAATT CAAGGAAATC AGCGGTTATT ACTTTAATAA TAAAAGCAGG TCCTGGGATC TTATTTCCAA ATGGAAAACG CATTCCTCGG AAAAGGAACT TTCCTTCTCC GTCGGATTCG TGGAAGATTT CATGCGTAAT TTTGAATCAG CCAAGAAGGC CCGCGGAGCC TTCTTTGGCC CCAGCTTCGC GTACAAGGAC GGCAAATGGC ATCCCAATAC CAGCGTAACG TTCACCGGCG ACCCAACCCC CTCCACCAAC GTCATGGCGA ACATCCAGCC TGATGGTTCC GTGCTGCTTC AGACGGGGGG AACTACGAAA ATGACGGATT TCAAGCTGTT CCAAAATCGT CCCCTGCCCC AGAATATCAA GCTGGTCCTG CCTGACAAGG CCGTTACCAG TCTTGTTCAG GAGAACATTA ACTGA
|
Protein sequence | MRLLSSAAVI CAALFSGTIL HAQDPELLAK RQCRSVHINQ QGHPSQASAL YNVVKAKTSV PGTYFCAMNF DDGYIGFQEQ SNGKKVIIFS IWDPVAHGDN PNDVPEEERT KLVKLGKDAR SGRFGGEGTG GQSFVDYPWA IGENMRFLVC VKKMGKFKEI SGYYFNNKSR SWDLISKWKT HSSEKELSFS VGFVEDFMRN FESAKKARGA FFGPSFAYKD GKWHPNTSVT FTGDPTPSTN VMANIQPDGS VLLQTGGTTK MTDFKLFQNR PLPQNIKLVL PDKAVTSLVQ ENIN
|
| |