| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1586 |
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| Symbol | |
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| ID | 6273640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1907415 |
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| End bp | 1909055 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613646 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001878187 |
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| Protein GI | 187736075 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.562805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTACTCCA ACGAATCATA TCTCATCGAA CTTCTTACGC AGGCCGGATA TCTGAATGAA
GAAATTCTTC AGTACGCGCG CAGTCAAAAA TCTCCCACCC AGGACCTGGT CGATTTTCTG
ATTCAGGCCG ATTATCTTAC GGAAGACGTC ATCGCTCAGG TGGCGGCGTC AAACTCCCTG
CTCCCCGTCG TGGACCTGGG CTCCATGCAC ATCCCCCAGG AGGTGCGCGA ACTCATTACG
CCGGAACTTG CCAGGCGCTT CCGGGCCATC CCCATTTCCG ACGACGGTTT TTCCATCAAC
ATTGCTATTG ACGACCCCCT GAATCTGGAA ACCATGGACA GCCTGCCCCA GCTGATGGGG
CGGGATGTGA TTTTCAGCGT CGCCACCCAC AGCGCGGTAG AAAGCCGGTT GAATGAATTT
TACCGGGATC TGAGCGTTCC GGAAGAAACC GACGGGCTGG AAGGGGAGGA TGCTCCCATT
ATCCGGCTGG TGCAGCAGAT GCTGACGGAC GCTTTCAAAA TGAGGGCTTC CGACATCCAC
ATTGAGCCCA TGGAAAACAG GCTCCGCATC CGCTACCGCG TGGACGGCAA GCTGGTGGAA
GTGGCCACGC ATCCCAAAAA ACTGCTCAGC CCCATCATCG CTCGCCTCAA GGTAATGAGT
ACCACCATGA GCATTGCGGA AAAACGCATG CCCCAGGACG GGCGAATCCA GATGAGCATC
GGCGGCAAGC AAATCGACCT CCGTGTTTCA TCCGTCCCCA GCAACCACGG GGAAAGCATC
GTCATGCGTA TCCTGGACAA ATCCGCCCTG GTGCTGGGCC TTCCCCAGCT CGGATTTTTC
TCGGATGATG AAGCTGTGTT CGACCGCCTC ATCACGCTGC CGGACGGCAT TATCCTGGTG
ACGGGTCCTA CCGGTTCCGG TAAAACCACG ACCCTTTACG CGTGCCTGAA CCACATCAAC
CGCCCGGATA AAAAAATCAT CACGGTGGAA GACCCTGTGG AATACGAACT CTCCGGCATC
AACCAGGTAA TGGTAAAGGC GGATATCGGC ATGACCTTCG CCGCCGCCCT GCGCGCCATG
CTCCGCCAGG CTCCCAACAT CATCATGATC GGGGAAATTC GAGACATGGA AACAGCCAGC
ATCGCCATCA ACGCCTCCCT GACGGGGCAC CTCGTATTCT CCACCCTTCA CACCAATGAC
GCTCCCAGCG CCGTGGCCCG TCTGGCGGAC ATCGGCATCA AACGCTTCCT GATCGCCTCC
TCCGTCCGCG CCATCATGGC CCAGCGTCTT GTCCGCAAGC TGTGCGACCG CTGCAAGGTG
GACGGCACTC TGACGGAAAA GCAGGCGCAT ACGCTGAACA TTGACATGTC CCGCCTTGCC
CAGGGCCAAA TCAAGGCGCC CCACGGCTGC GACTTTTGCC GCGGCGGCGG ATTCAAGGGC
CGGATGGGGC TGTTTGAGAT TTTCGAAATC GACGACGAGG TGCGCCGCAT GATTAACGAA
AATCTGACTT CCCCCCAGCT GCGCCAGCGC GCCCGGGAAC TGGGCATGAG AACCTTGAGG
GAAGACGGCG TACGCAAAGT GCTGGCCGGC CTTACTTCTC CGGAAGAAGT GCTGAACGTC
ACCATGGGAG ACGCCAACTG A
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| Protein sequence | MYSNESYLIE LLTQAGYLNE EILQYARSQK SPTQDLVDFL IQADYLTEDV IAQVAASNSL
LPVVDLGSMH IPQEVRELIT PELARRFRAI PISDDGFSIN IAIDDPLNLE TMDSLPQLMG
RDVIFSVATH SAVESRLNEF YRDLSVPEET DGLEGEDAPI IRLVQQMLTD AFKMRASDIH
IEPMENRLRI RYRVDGKLVE VATHPKKLLS PIIARLKVMS TTMSIAEKRM PQDGRIQMSI
GGKQIDLRVS SVPSNHGESI VMRILDKSAL VLGLPQLGFF SDDEAVFDRL ITLPDGIILV
TGPTGSGKTT TLYACLNHIN RPDKKIITVE DPVEYELSGI NQVMVKADIG MTFAAALRAM
LRQAPNIIMI GEIRDMETAS IAINASLTGH LVFSTLHTND APSAVARLAD IGIKRFLIAS
SVRAIMAQRL VRKLCDRCKV DGTLTEKQAH TLNIDMSRLA QGQIKAPHGC DFCRGGGFKG
RMGLFEIFEI DDEVRRMINE NLTSPQLRQR ARELGMRTLR EDGVRKVLAG LTSPEEVLNV
TMGDAN
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