Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1584 |
Symbol | |
ID | 6273650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1904390 |
End bp | 1905658 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642613644 |
Product | type II secretion system protein |
Protein accession | YP_001878185 |
Protein GI | 187736073 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.738971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAAT ATCAATACAC AGCACTTGAC CATAAAGGCG ACCAGAAAAC AGGTACCCTG GAGGCCAATT CCGAAGCGGA GGCCATGGAA TCCATCCGGG CGCATGGCCT GTACCCCACC CAGATCGTAG AAGCGGGCAA GGGCAAGATT CAGCAGACGC CTGCCGCCAA GAAAAAGGCC AAGGGAGCCA AGAAGCAAAA AGGCAAGCTG GGAGGCAAAA TCAAGGCCAA GGCTCTGATG ATTTTCACCC GCCAGCTTGC TACGCTGATT GACGCGGGGC TTCCCCTGCT CCAGAGTTTG AACGTGCTGG CCAAACAGGA GGCAAACCCC AACCTGCGCG TAACCATTGA GGCTCTTGGA GATTCCGTTC AGGGCGGCTC CACCTTCTCG GAAGCCCTGG CCCAACACCC CAGAATTTTT GACCGCCTGT TTGTCAACAT GGTAAAGGCC GGGGAACTGG GCGGTGTGCT GGAAGTCGTG CTGAACCGTC TGGCGGAATA CCAGGAAAAG GCCCAAAAGC TGAAAAGCAA GGTGATCTCC GCCATGGTGT ATCCCTCCAT CGTCCTGTTT ATCGCCGTAG GCATCGTGAT CTTCCTGATG CTGGTCATCG TGCCCAAATT CAAGGCGATG TTCGCAGAAC AGAACCAGGA ACTTCCCGGT ATTTCCGAGT TTGTGTTCGG CATCAGCGAC TGGTTCATGG CCGCCCCCTT CTTTGTGCCC AATGCCGTCA TTCTGGCCGC GGTAGTCGCC ATCCTGTACG CTGTTTTCAC GGCCATGAGC AAGACGCCCA ACGGACGCCG CAAGATTGAC TCCGCTCTGC TGACCATGCC GGTCATCGGC AATGTGCAGA GCAAAAGCGC CATCGCCCGC TTCGCCCGAA CCTTCGGTAC GCTGGTGACT TCCGGCGTCC CCATCCTCCA GGCGCTTACC ATCACGAAGG ATACCGCCGG CAACATGATC GTGGGAGACG CCATCGGCCT CATCCATGAC TCCGTCAAGG AAGGCGAATC CGTAGTTACG CCCATGTCCT CCTCCAAGCT TTTCCCGCCC ATGGTAATCT CCATGGTGGA CGTGGGGGAA GAAACCGGCC AGTTGCCGGA CATGCTCCTG AAAATCGCGG ACGTGTATGA TGATGAAGTG GACAATGCCG TGGGAGCTAT GACCTCCATG CTGGAACCCA TCATGATCGT ATTCCTGGCC GTGGTCGTGG GCGGCATCGT GTTCGCCATG TTCCTTCCCC TCCTGCAGGT TATTGAAAAG ATGGGATAA
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Protein sequence | MPKYQYTALD HKGDQKTGTL EANSEAEAME SIRAHGLYPT QIVEAGKGKI QQTPAAKKKA KGAKKQKGKL GGKIKAKALM IFTRQLATLI DAGLPLLQSL NVLAKQEANP NLRVTIEALG DSVQGGSTFS EALAQHPRIF DRLFVNMVKA GELGGVLEVV LNRLAEYQEK AQKLKSKVIS AMVYPSIVLF IAVGIVIFLM LVIVPKFKAM FAEQNQELPG ISEFVFGISD WFMAAPFFVP NAVILAAVVA ILYAVFTAMS KTPNGRRKID SALLTMPVIG NVQSKSAIAR FARTFGTLVT SGVPILQALT ITKDTAGNMI VGDAIGLIHD SVKEGESVVT PMSSSKLFPP MVISMVDVGE ETGQLPDMLL KIADVYDDEV DNAVGAMTSM LEPIMIVFLA VVVGGIVFAM FLPLLQVIEK MG
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