Gene Amuc_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1582 
Symbol 
ID6273664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1902633 
End bp1903577 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content53% 
IMG OID642613642 
Productglycosyl transferase family 2 
Protein accessionYP_001878183 
Protein GI187736071 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTA TTTCCCTGAT CGTTCCCTGC CTGAATGAAG AAGAAGCCAT TCCGGCGTTC 
AAGCAAGAAA TAGACCGGGT TTTCAAGGAA TGCCTGGAGG GCTACGCCCC GGAACTTATC
TTCGTGGACG ACGGTTCCAC GGACCGCTCC CTGGAAATGA TTAAGAAAAT GGCGGAACAC
TCCCCTGAAG TAAAATTCAT TTCCTTCTCC CGCAATTTCG GGAAGGAAGC CGCCATCTAT
GCGGGCCTGG AAGCGGCCAC AGGGGATTAT GCCGCCGTCA TGGATGTGGA CCTTCAGGAT
CCTCCTTCCC TGCTTCCGGA TATGCTGAAA GCCATTGAAA AGGAAGGATA TGACTGTGCG
GGAACGCGCC GCGTCACCCG GCAGGGGGAA CCGCTGCTGC GGTCCTTTTT CGCCCGCGCC
TTTTATAAGA CGATTCATCA GATATCGGAC ACCCGCATCG TGGACGGAGC CCGGGACTAC
AAGCTGATGA CTCGGCCCGT ACTGGAAGCC CTGCTTTCCC TGAAGGAGTA CAACCGATTT
TCCAAAGGGC TGTACGAATG GGTGGGGTTC CGGACCAAAT GGTTTGAATA TGAAAATGTG
GAACGGGTGG CAGGAGAAAC CAAGTGGTCT TTCTTCAAGC TGTTCCTGTA CTCCATTGAA
GGTATCGTGG CCTTTTCCAC CGCCCCTCTG GCGCTGGCTT CCATCATGGG GGTACTTCTT
TCCTTCATCT CATTCCTTTC CATCATTATC TTGACTGTCC GCGAATTGAT CTGGCCCCAT
TCCGCTTATG GATGGACTTC CCTGGTATGC GTCTTCTGCA TGATGGGTGG CATCGTGCTG
CTGTGCTTGG GCATTTTGGG CCAATATCTG GCCAAAACCT ATACGGAAGT TAAAAAGCGC
CCTATTTACA TCGCCAGGGA ACGTTCCATC AAGCCTTTCA ACTAA
 
Protein sequence
MKRISLIVPC LNEEEAIPAF KQEIDRVFKE CLEGYAPELI FVDDGSTDRS LEMIKKMAEH 
SPEVKFISFS RNFGKEAAIY AGLEAATGDY AAVMDVDLQD PPSLLPDMLK AIEKEGYDCA
GTRRVTRQGE PLLRSFFARA FYKTIHQISD TRIVDGARDY KLMTRPVLEA LLSLKEYNRF
SKGLYEWVGF RTKWFEYENV ERVAGETKWS FFKLFLYSIE GIVAFSTAPL ALASIMGVLL
SFISFLSIII LTVRELIWPH SAYGWTSLVC VFCMMGGIVL LCLGILGQYL AKTYTEVKKR
PIYIARERSI KPFN