Gene Amuc_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1575 
Symbol 
ID6275529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1898030 
End bp1898593 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content53% 
IMG OID642613635 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_001878176 
Protein GI187736064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGACA TCGTATATTT TGATTTGGAA ACCCGTCATT CCGCGGCGGA GGTGGGCGGC 
TGGCATAATA CGGCCGAGAT GCGCCTTTCC GTGGGCGTGA CTTATTCCAC GGCTTCCGGC
AAATATACGA TTTATTCTGA GGAAATGGTG GATGATCTCA TCCGGCAGCT TTCCCAGGCC
GACCTGGTGG TGGGTTACAA CCACGAGCAT TTCGACTATG GCGTGCTCCA GCGTTATACG
ATGTGGAACA TGATTGATAT CACGAACAAC CTTGATTTGT GCAAGGACAT CGAACAGCGC
GGGGGAGTGC GCGTCAAGCT GGATTCCGTG GCGGCCGCCT CCATCGGTTC TTCAAAAACG
GCCGTGGGCA CCCAGGCTCT CAAATGGTGG GCGGAATACG CGCAGACGGG TAATACGGAG
CTTTTAATGG ATATAGCCCG TTATTGCTGT TTTGACGTGA AGGTGACGCG GGATGTGCAC
TGGTACGGGG CGGAACACGG TTTCATCCGT TATGATGATA AAAAGGGCGG CCAGGTGGAA
TTGCCCGTGG ATTGGAAATT GTAA
 
Protein sequence
MRDIVYFDLE TRHSAAEVGG WHNTAEMRLS VGVTYSTASG KYTIYSEEMV DDLIRQLSQA 
DLVVGYNHEH FDYGVLQRYT MWNMIDITNN LDLCKDIEQR GGVRVKLDSV AAASIGSSKT
AVGTQALKWW AEYAQTGNTE LLMDIARYCC FDVKVTRDVH WYGAEHGFIR YDDKKGGQVE
LPVDWKL