Gene Amuc_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1566 
Symbol 
ID6273648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1890176 
End bp1891363 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content57% 
IMG OID642613626 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001878168 
Protein GI187736056 
COG category[C] Energy production and conversion 
COG ID[COG1979] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAATT TCGTTTACGA TAACAAAACC ACTCTTATTT TCGGAAAAGG CACCCACCAT 
GAAACGGGAA CCCTTCTCAA GCCGTTAGGC AAAAAAATCC TGCTTCATTA CGGTAGCGGC
AGCATCAGAC GTTCCGGTCT TTACGATGCC GTCACGGCGT CCTTAAAAGC CGCCGGCGTG
GAGTATGAAG AACTGGGAGG CGTCCAGGCA AACCCTACGC TGCCCCTGGT GTATGAAGGC
ATCCGCCTCT GCCGGGAACA CGGCCTGGGC CTCGTGCTGG CCGTGGGAGG AGGCAGCGTG
ATTGACTCCG CCAAAGCGAT TGCGCTGGGC GTTCCCCATG AAGGGGACGT ATGGGAACTA
TACCTTTCCA AAAAACAGCC TCAGTCCGAC CCTCTGCCCG TCGCAACCGT GCTGACCATT
CCCGCCGCGG GCAGCGAGAG CAGCCCGAAT ACGGTCATCA CCAATGAAGA GACCAGAAGA
AAACTGGGGT ACGGTTCCCC CAAACTGCGC CCCGTATTCA GCATTATCAA CCCGGAATTG
TTCTTTACGC TCCCGCACCG CCAGATGGCC AATGGCGTCA GCGACATGAT GAGCCACATT
TTTGAGCGCT ATTTCACCAG AACCCTGCAT ACGGACCTTT CCGACAGCCT TTGTGAGGCC
ACCCTGCGCA CCATCATGAA AAACGCCCGC ATCCTGAACG GGAACCTGAA TGATTACAAC
GCCTGGGCGG AAATCGCGTT TTCCGGCAAC ATCGCCCACA ACAACCTGTT GGGGGTAGGC
CGCGAACAGG ACTGGGGCTG CCACGCCATG GAACACGAAT TGAGCGCACT GTACCATGTG
GACCACGGCG CAGGCCTGGC CGTCGTCACC CCGGCCTGGA TGAAGTATGT TTCCCCCAAA
CACCAGGAAA TATTCGTGCA GTTCGCCGTC AATGTGATGG GAGTGGAAGG TTCCTTCCGG
GAACCGTCAG CCATCATCCG GGAAGGTATT TCCCGCCTGG AACGTTTTTA CCGGGAATTA
GGGCTTCCGA CGACTATGGA AGAACTGAAC ATCCTTCCCG GGGATTTCCC CCTGATGGCG
GAACAGGCCG TCAGTGTGCG CGGCCCCGTC GGCGGACTGG AAAAGCTGGA TGTCCGGGAC
ATCCAGGCCA TCTACCGACT GGGTTGCAGT AATCTGCAGC ACGCATGA
 
Protein sequence
MLNFVYDNKT TLIFGKGTHH ETGTLLKPLG KKILLHYGSG SIRRSGLYDA VTASLKAAGV 
EYEELGGVQA NPTLPLVYEG IRLCREHGLG LVLAVGGGSV IDSAKAIALG VPHEGDVWEL
YLSKKQPQSD PLPVATVLTI PAAGSESSPN TVITNEETRR KLGYGSPKLR PVFSIINPEL
FFTLPHRQMA NGVSDMMSHI FERYFTRTLH TDLSDSLCEA TLRTIMKNAR ILNGNLNDYN
AWAEIAFSGN IAHNNLLGVG REQDWGCHAM EHELSALYHV DHGAGLAVVT PAWMKYVSPK
HQEIFVQFAV NVMGVEGSFR EPSAIIREGI SRLERFYREL GLPTTMEELN ILPGDFPLMA
EQAVSVRGPV GGLEKLDVRD IQAIYRLGCS NLQHA