| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1558 |
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| Symbol | |
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| ID | 6273639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1870950 |
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| End bp | 1872395 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642613618 |
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| Product | peptidase M50 |
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| Protein accession | YP_001878160 |
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| Protein GI | 187736048 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGCA TTCTTTCCGT CCTTGCCACT ATCGCCATTA TTTTCGGCGT GGTGATGTTG
TTTAACTTCA TGATTTTTAT TCATGAACTT GGTCATTTTT TCGCTGCCCG CTGGCGTGGT
CTGTATGTGG ACAGATTTCA AATCTGGTTT GGCCGTCCCA TCTGGAAAAA AACGGTTAAC
GGCGTGCAGT GGGGGCTGGG GTGGATTCCG GCCGGAGGTT TTGTATCCCT GCCGCAGATG
GCTCCTATGG AGGCCATTGA AGGACGTGCG GAGCTTCCCA AGGATTTGAA GCCGGTTACT
CCCTTGGACA AGATTATCGT GGCCGCCGCT GGGCCTGCCG CTTCTTTTCT GCTGGCTGTG
TTGTTTGCCG TGGCCGTCTG GATGGTGGGC AAGCCGGATG TGGAGATGGG CGTGACTACG
GTCGGTTTTG TTGCTCCGGA CAGCCCTGCG GCTCAGGCCG GCATTCTTCC CGGCGACAAG
ATTGTGAAAG TGGACGGCCA TCCTGTGGAC AAGTGGGCGG GCAATATGGA AGGCGTGCGG
GAATTGATCA TGCTGGGCGA GCATGACCGG GTGGTTTTTA CGGTGCAGAG ACCTGGACAT
GAAGGAGAGA TGGAAATTTC CTGCGGATTC CGGATTCCGG AAACGTCCTG GTGGCAGCGC
TCCGGCATGC GTCAGGTGGG GTTGATGCAG GCCATGCCCT GCGTGATTGG GGAAGTGATT
CCCAATTCTC CTGCCGCACT GGCCGGATTG AACCCGGGCG ATAAGGTTGT GGGTGCCAAT
GGAGAACGCC TCTGGAACCC TGCCGCACTG GATGTTCTGC TGAAGAAGAA TGAACCGCTC
TTGCTGGATG TGACGGACAG GGCCGGGGTT GCAAGGCAGG TGAATATCCA GGGGAAGCTT
CCGGAGAATT GGCACAATGG TGCGGACGGT TCCCTGCTCA AGGGGGCCCA GCCTATTCTG
GGCGTGAGCT GGGACCTGAG TTCCGTGGGC CGAGACGTTA CCGTCCATCC TTCTCCGTGG
GCGCAGATCA AGCAGAGTCT GAAATGGATG GGGGATACCC TGGCGAAGGT GGTGGCTCCC
GGCAGCAGCG TGGGCGTGGA GCATCTTTCC GGACCTGTGG GAATTGCCAA TCAGTTTTAC
AAGATGTTCT CTCTGGAGGA AGGGTGGAAG CTGGCCCTGT GGTTTTCCGT GGTGTTGAAC
GTGAACCTGG CGGTTCTGAA TATTCTGCCT CTTCCGGTAG TGGATGGCGG CCATGTGGTC
ATGAATGCCA TTGAATTGGT TTTCCGGCGT CCCCTGAATG TAAAAGTTCT GGAATTCGTC
CAGTTCGGCT TTGTGTTCCT GCTGATGGGG TTCTTCCTGT TTGTGACATT CAAGGATGTG
GGGGATTTCT TTGGCAAGAA GCCGGACAAG CTGCCCACCC CGGTATTCAA GGCCGTCGCG
GATTAG
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| Protein sequence | MDSILSVLAT IAIIFGVVML FNFMIFIHEL GHFFAARWRG LYVDRFQIWF GRPIWKKTVN
GVQWGLGWIP AGGFVSLPQM APMEAIEGRA ELPKDLKPVT PLDKIIVAAA GPAASFLLAV
LFAVAVWMVG KPDVEMGVTT VGFVAPDSPA AQAGILPGDK IVKVDGHPVD KWAGNMEGVR
ELIMLGEHDR VVFTVQRPGH EGEMEISCGF RIPETSWWQR SGMRQVGLMQ AMPCVIGEVI
PNSPAALAGL NPGDKVVGAN GERLWNPAAL DVLLKKNEPL LLDVTDRAGV ARQVNIQGKL
PENWHNGADG SLLKGAQPIL GVSWDLSSVG RDVTVHPSPW AQIKQSLKWM GDTLAKVVAP
GSSVGVEHLS GPVGIANQFY KMFSLEEGWK LALWFSVVLN VNLAVLNILP LPVVDGGHVV
MNAIELVFRR PLNVKVLEFV QFGFVFLLMG FFLFVTFKDV GDFFGKKPDK LPTPVFKAVA
D
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