| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1557 |
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| Symbol | rplT |
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| ID | 6273641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1869947 |
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| End bp | 1870330 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642613617 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001878159 |
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| Protein GI | 187736047 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCACGTG CCACTAATGG ACCGGCCTCT CGCAAGCGTC GTAAGCGCAT TCTCTTGCGT
GCCAAGGGTT TCCGCGGTTT CCGCAGCAAA CTCTTCCGCT ACGCCAAGGA TGCTGTTTAC
AAGGCTTGGC AGTATGAATA CCGCGACCGC AAGCGTCGGA AGGGACAATT CCGCCGTCTT
TGGATCGCCC GTATTTCCGC TGCCGTCCGC GACCGCGGTC TGACCTATTC CCGCTTTATG
GAAGGCTTGA AAGCCGCCAA TATTGATTTG GACCGCAAGG TTCTTGCCGA TTTGGCCGTC
TCTGACGAAA AGGCTTTTGA CGTTATCTTC GCTCAAGCGA AGAAGGCCAT TGAAGCCAAG
GATGGCGCCG CTCTCCGCGC CTGA
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| Protein sequence | MPRATNGPAS RKRRKRILLR AKGFRGFRSK LFRYAKDAVY KAWQYEYRDR KRRKGQFRRL
WIARISAAVR DRGLTYSRFM EGLKAANIDL DRKVLADLAV SDEKAFDVIF AQAKKAIEAK
DGAALRA
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