Gene Amuc_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1556 
Symbol 
ID6273642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1869588 
End bp1869797 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content58% 
IMG OID642613616 
Productribosomal protein L35 
Protein accessionYP_001878158 
Protein GI187736046 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0291] Ribosomal protein L35 
TIGRFAM ID[TIGR00001] ribosomal protein L35 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.637628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA AAGGTGGTAT CAATAAAACC CGCAAGGCAG TCGCCAAGCG TTTCAAGGTA 
ACCGGCACGG GCAAGGTACT GCGCCGTAAA CAGGGCAAGC GCCACATCCT CCAGAAGAAG
TCCAGCAAGC GCAAGCGCCA GCTTGGCAAG GTGGCTCTGG TGGACGAGAC GCAAGTCTGG
GCAGTCAAGC AGAACCTGCC TTTCGCCTAA
 
Protein sequence
MTRKGGINKT RKAVAKRFKV TGTGKVLRRK QGKRHILQKK SSKRKRQLGK VALVDETQVW 
AVKQNLPFA