| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1549 |
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| Symbol | |
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| ID | 6273656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1862642 |
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| End bp | 1863481 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642613608 |
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| Product | Cof-like hydrolase |
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| Protein accession | YP_001878151 |
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| Protein GI | 187736039 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.678007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCCG TCAAACTTAT TGCGTCCGAT ATGGATGGGA CGCTGCTTAA TGGAAAAGGT
GAATTGGACC CTGCGTTTTT TCCCTTGTTT AGGGAACTTG AGCTTCGCGG CATTCGTTTT
GCGGCAGCAA GCGGCCGCCA GTATGACGGA TTGCTCCGGA CCTTTGCCCC CGTGGCGGAC
CGGATGCTGT TTATTGCCGA GAATGGCGCT TATGCGGCGG CGGGTAGAAA AGAATGGCTG
CTTCTGGACA TGGATCATGA AACGGTAGCC GGTTTGATTG CCGGGATCAG GTGCATTGAA
GGAACCTGCA TCGTCCTCGC AGGGCGGGAT TCCGCATATA TTGAGGACAA ACAGCCGGAA
TTCGTCCGGG AGGCCCGCAA ATATTACACA CGCTGTCAAG AAGTGGGGGA CCTGCTGGAC
GTGCGGGGAG ACAAACTTTT GAAAATAGCA GTATATGACT TCCTGGGAGC CGGGGAAAAC
AGTTATCCCC GGCTGAAGCA TTTGGAACAT GGCTTCCAGG TGGCTGTCTC CGGAGAGAAA
TGGATGGATA TCAGCCGGAA AGGGGCCAAT AAGGGGGCCG CTCTGGAATT GATTCAGAGG
AAACTGGGAA TTTCTTCGGA GGAAACGATG GTTTTCGGGG ATCAGATGAA TGACGCTCCA
ATGATGCGGC AGGCGCGTTT CAGTTATGCC ATGGCGAATG CCGTGCCGGA AATCCGTTCC
ATGGCCGCAT TTGAGGCGCC GTCCAATGAG GAAAACGGAG TGATGCAGGT GCTTGGAAAG
ATGTTGGACG CCCATTCTCC GCAGGGAAGG GCCGGGAATT GCAGGAAACC CCGTCTCTAA
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| Protein sequence | MDSVKLIASD MDGTLLNGKG ELDPAFFPLF RELELRGIRF AAASGRQYDG LLRTFAPVAD
RMLFIAENGA YAAAGRKEWL LLDMDHETVA GLIAGIRCIE GTCIVLAGRD SAYIEDKQPE
FVREARKYYT RCQEVGDLLD VRGDKLLKIA VYDFLGAGEN SYPRLKHLEH GFQVAVSGEK
WMDISRKGAN KGAALELIQR KLGISSEETM VFGDQMNDAP MMRQARFSYA MANAVPEIRS
MAAFEAPSNE ENGVMQVLGK MLDAHSPQGR AGNCRKPRL
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