Gene Amuc_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1548 
Symbol 
ID6273657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1860743 
End bp1862104 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content56% 
IMG OID642613607 
ProductAnkyrin 
Protein accessionYP_001878150 
Protein GI187736038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.168363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACACA TGACTTTAAG AAAGAAAACT CTCTGGTTTC TTGGAGCTTT GAGCTTTTTT 
GCCTCTCTTG CCGCGGCTTT CGCTGTTTTC TGGCTGAACA GGAATGATTC TTCTCCCGCG
GAATGGAATT TCAACCCTAT CTGGACAAAA GCGGAAAAAG AACAAATTCT GACCGCAGCG
AATTTCACAG CCCATCGAAG CCCGGAACGT TTCATTTACC GCGGGCTTTC CCTCAATTCA
CGCCATATTG ACTGGCACAT GTTTTCCGAG GTTTCCATGC GCCAATATAT GAAGGACGAA
ATCAGGGAAC GGCTTCAGAT GATACGGGAC ACGGCGGAAA GCGCAGACGG ACGCTGCATC
ACTCCATCCC ATGAAACCCT GCTGCATCTC GCCGCCGGGC TCGGAGAAGT GCAGTTGCTG
AACCGCCTTT TACAGCGCCA TGCGGACCCG AACGTTCAGA TCATCCTGCC GCAACAGGCC
TTTCCCTCCA TTCCGGACTC CGAACAGGGA AATACCCCCC TGACTTACGC CTGCCAGCCA
GGCATGGACG ACTCCACGCC CCTGCCGGTG CATAACAGGC TCTCCTGCCT TAATCTCCTG
ATTCAGTACG GTGCGGATGT GAATAAACCG GGGCCGCTGG GCTGGCCGCC CCTCGTCATC
ACCTGTGTGG CCGGTATTGG AGGAGCACCC TATGAGGAAG CGGCCCTGTT TCTTCTGAAA
TGCGGTGCGG ATATTTCCCT CCAGCCTGAA TTGAAAGGTA AAAAAACAAG TCTGCTCACA
TGGGCCACGG CCGCCGGATA CCCCCTGCTG GTCCGCAAGC TTTGCGAAGC CGGGTACGAT
CCCAATTTCC GCGGGGAAAT GGCCCCGCCC CTTCTTTCCC TGAACCTGAA CACTCCGAAC
GCCGCACTGC AAATTGCACA TATTCTGCTG GAATACGGAG CGGACGTGAA TGCGGCCATG
CCCGCGTCCA CCACCCTGCC GGAAACCGCG GGAGACACGG CCCTGCTGAA CCTGTGCCGC
CAGCTGGCTT TCATTGATGT GTCCTGCCTC CCTCAAATCA GGGATCTGGT CAATCTCTTC
ATCAAAGAGG GAGCTGACGT CAACCATCAA AACGCCGCCG GAGAAACTCC CCTCATGGCA
TGCTGCCGAG GCATGCTGCT GGGAGACGAT TCCCTGGACC GGCTGAAACT GGGTATTGCG
CGTCTTCTGC TGGACCACCA CGCAAACCCA TCCCTGAAAG ACAAATACGG ACGCACAGCC
CTCCAGAGGA TAGGCAACCG GTCAAACGAA CATCTCCAGA TGGTGCTGAA ATACCTGCCG
GAATTAAGCG CTCCGCCGCT TCCGAAGAAG GAAAACCATT GA
 
Protein sequence
MIHMTLRKKT LWFLGALSFF ASLAAAFAVF WLNRNDSSPA EWNFNPIWTK AEKEQILTAA 
NFTAHRSPER FIYRGLSLNS RHIDWHMFSE VSMRQYMKDE IRERLQMIRD TAESADGRCI
TPSHETLLHL AAGLGEVQLL NRLLQRHADP NVQIILPQQA FPSIPDSEQG NTPLTYACQP
GMDDSTPLPV HNRLSCLNLL IQYGADVNKP GPLGWPPLVI TCVAGIGGAP YEEAALFLLK
CGADISLQPE LKGKKTSLLT WATAAGYPLL VRKLCEAGYD PNFRGEMAPP LLSLNLNTPN
AALQIAHILL EYGADVNAAM PASTTLPETA GDTALLNLCR QLAFIDVSCL PQIRDLVNLF
IKEGADVNHQ NAAGETPLMA CCRGMLLGDD SLDRLKLGIA RLLLDHHANP SLKDKYGRTA
LQRIGNRSNE HLQMVLKYLP ELSAPPLPKK ENH