Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1547 |
Symbol | |
ID | 6273661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 1858942 |
End bp | 1860729 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642613606 |
Product | hypothetical protein |
Protein accession | YP_001878149 |
Protein GI | 187736037 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.180047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACC TGTTGTTTGC ATTGTTGACC GGTTCCTTTT GTTGCTGTTA TGCCCAACAG AAGGCCGCAC CCGTTCCGGA ACCTGAAGTT GTCGCCACTC CGCCGGCTGA TGCGGGGCGC GGCCTTATCC GTGTGGACTC CCGTGAAATA CGCCATTATT CCGGTACCCG CAAGGAACCG GATTACCTGG TCAGCAGGGA TAACGGAAAA ACATGGGAAA TGAAGGCCGC TCCGGCTGGC TACCCTCCCA ACTACGGTGG CATTCCCAAA GAATCTCCAG CTATTGTGCG CAACCCTCTG ACCAGGGAAT TCATTCGTGT GCAGCCTATC GGGGGCTTTG TATTTCTTTC CAGGGGTGGG CTGGACGGCA AGTGGCTTGC CGTCACGAAT GACGGCAAAC TGGAAGAAGA CTGGAAAGAC CCGGAAAAGA GGAAAAACCT GAAAAAACTG GGCGGCATCA TGCGAACCCC CGTTTTTGTG AACAAGGGCC GCAGGGTGAT CGTGCCGTTC CACAACATGG GCGGCGGCAC CAAGTTCCAT ATTTCCGATG ACGGGGGGCT GACCTGGCAT GTATCCAGGA ACGGTGTTAC TTCCCCCAGA CATGAAGCCA GGCCCCCCCA CCAGGGCGTC AGATGGTTCA ACAATGCCGT GGAAGCCACG GTTTTGGAAA TGAAAGACGG TACGTTGTGG GCGCTTGCCC GCACCTCCCA GGACCAGGCG TGGCAGGCTT TTTCCAAGGA TTACGGGGAA ACGTGGAGCA AACCGGAGCC TTCCCGCTTT TTCGGCACCC TGACCATGAA CACGTTGGGA CGCCTGGATG ACGGAACTAT CGTTTCCCTG TGGACGAATA CAATGGCTCT GCCTGAAAAC GCCACAGCTG GCAACGGAAC GTGGGAGGAT GTATTCACCA ACCGTGATTC CCACCACATT GCTATGTCCG GGGACGAGGG CAAAACCTGG TACGGGTTCC GGGAGATTAT CCTGGACGAA CACCGCAACC ATCCCGGCTA TGCTACGCTG GATGGTCCGG AAGACCGCGG CAAACATCAG AGCGAAATGG TGCAGCTGGA CAAAAACCGC ATCCTTATTT CCCTGGGGCA GCATAAAAAC CACCGCCGCC TGGTTATTGT GGACCGCCGC TGGGTAGGGG CCAAGACGCG TGCCACGCAG ACGGGGAAAG ATTTGGATTC CCAGTGGACC ATTCACACTT ATATCCCCCA GAAAAAAGGC CATTGCAGTT ATAACCGCAA GCCTTCCGCC GAGTTGGTTC AGGATCCGTC CGGGGGCACG AAGAAGGTGT TGCAAATCAA GCGTCTGGAT GATCCCGAAC TGGTCAATGA AAAATCCAAT GTGGATTACC GGAACGGCGG AGCTACCTGG AACTTTCCGA ACGGGACCAC GGGGCTGGTC AAATTCCGCT TCCGTGTAGT GGACGGGGAG CAGGCGGATG ATTCCGGCCT TCAGGTCTCT CTGACGGACC GGCTGTTTAA TGCCTGTGAT TCCACTACGA AGGATTATGC CCTGTTTACC TTCCCGATCA GGCTGAAACC TGCGCCCCAT CTGTTGCTGG GGATGAAAAA AGTGCCTTTC ACGCCCGGCG CGTGGCATGA AATTTCCCTT CTTTGGCAGG GTGGGCAGGC CGTGGTGTCT CTGGACGGAA AGAAGGCCGG AACGTTGAAA ATGGCTAATA AGTCCCCCAA TGGAGCCAGT TATATCCATT TCATCAGCAC CGGGTCCCAA CCGGATGCCG GCATTCTGCT GGATACGGTG AATGCCCGGG TGAAGTAA
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Protein sequence | MKNLLFALLT GSFCCCYAQQ KAAPVPEPEV VATPPADAGR GLIRVDSREI RHYSGTRKEP DYLVSRDNGK TWEMKAAPAG YPPNYGGIPK ESPAIVRNPL TREFIRVQPI GGFVFLSRGG LDGKWLAVTN DGKLEEDWKD PEKRKNLKKL GGIMRTPVFV NKGRRVIVPF HNMGGGTKFH ISDDGGLTWH VSRNGVTSPR HEARPPHQGV RWFNNAVEAT VLEMKDGTLW ALARTSQDQA WQAFSKDYGE TWSKPEPSRF FGTLTMNTLG RLDDGTIVSL WTNTMALPEN ATAGNGTWED VFTNRDSHHI AMSGDEGKTW YGFREIILDE HRNHPGYATL DGPEDRGKHQ SEMVQLDKNR ILISLGQHKN HRRLVIVDRR WVGAKTRATQ TGKDLDSQWT IHTYIPQKKG HCSYNRKPSA ELVQDPSGGT KKVLQIKRLD DPELVNEKSN VDYRNGGATW NFPNGTTGLV KFRFRVVDGE QADDSGLQVS LTDRLFNACD STTKDYALFT FPIRLKPAPH LLLGMKKVPF TPGAWHEISL LWQGGQAVVS LDGKKAGTLK MANKSPNGAS YIHFISTGSQ PDAGILLDTV NARVK
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