Gene Amuc_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1527 
Symbol 
ID6274623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1826814 
End bp1827803 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content58% 
IMG OID642613586 
Productaldo/keto reductase 
Protein accessionYP_001878129 
Protein GI187736017 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.137113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.101936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATC TTCCAGATCC CGGCCGCTAT AGCCACGCAG CCTACCGCCG CTGCGGGCGC 
AGCGGGCTGC TGCTTCCTCC CGTTTCCTTG GGGCTTTGGC ATAATTTTGG CGCTGCGGAT
GATTTTGAGA ACGCCCGTCG GCTTATTCAC GGCGCGTTTG ATGCCGGTAT CACGTATTTT
GACCTGGCGA ATAATTACGG ACCTCCTCCC GGTTCGGCGG AAGAATGCTT TGGCCGTATT
TTCATGCAGG ATTTGTCCCG TTTCCGTGAT GAACTTGTTA TTGCAACCAA GGCGGGGCAT
CTGATGTGGC CCGGCCCGTA TGGGGATTGG GGATCCCGCA AACACATGCT TGCCAGCCTG
GACCAGTCCC TTTCCCGCAT GAAGCTGGAT TATGTGGATA TTTTCTACGC GCACCGGCAT
GATCCGGAAA CTCCCCTTGA AGAAACGGCG GGAGCCCTTG TTACGGCGGT TCGCTCCGGA
AAGGCCCTGT ATGCCGGTAT TTCCAAGTTC CCGGCGGAAC AGGCCAGGCA GATGTGCTCC
ATGCTTGGGG AGGCCGGCGT TCCGTGCCTG GTGCATCAGA TCCGGTACAA TATGTTTAAT
CGGGAACCGG AGAAATCCGT TTTTCAGGCT GTTCGGGAAA CGGGTACCGG GTGCGCCGCT
TTCTCTCCCC TGGCCCAGGG GATGTTGACG GACCGTTATC TGGAAGGCAT TCCCGAAGAT
TCCCGCGCGG CGGGTTCCTC CGTCTTTTTA ACAAAGGAGC GGGTTCTTCA GCATGGGGAT
AAAATTCGCC GCCTGGCCGC CCTGGCCCGG AGCCGGGGCC AGAGCCTTGC CCAGATGGCT
CTGGCCTGGG TGCTGAAAGA TCCCGTAGTG ACCACGGCCC TGATTGGAGC CAGCCGCCCC
TCGCAAATCA GGGATTGCCT GAAAGCACTG GATAGTGCGC CGTTTACGCC GGAGGAGCTC
TCTCTGATTG ACGCAGATGC GGATAGATAG
 
Protein sequence
MNYLPDPGRY SHAAYRRCGR SGLLLPPVSL GLWHNFGAAD DFENARRLIH GAFDAGITYF 
DLANNYGPPP GSAEECFGRI FMQDLSRFRD ELVIATKAGH LMWPGPYGDW GSRKHMLASL
DQSLSRMKLD YVDIFYAHRH DPETPLEETA GALVTAVRSG KALYAGISKF PAEQARQMCS
MLGEAGVPCL VHQIRYNMFN REPEKSVFQA VRETGTGCAA FSPLAQGMLT DRYLEGIPED
SRAAGSSVFL TKERVLQHGD KIRRLAALAR SRGQSLAQMA LAWVLKDPVV TTALIGASRP
SQIRDCLKAL DSAPFTPEEL SLIDADADR