Gene Amuc_1511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1511 
Symbol 
ID6274636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1803074 
End bp1804186 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content55% 
IMG OID642613570 
Producthypothetical protein 
Protein accessionYP_001878113 
Protein GI187736001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.000528677 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCAAAC GTCTTGTTCA ATTGTTTCTT CTGTTTTTTC TGGCTGCTGC GGGTGTTCTG 
GCGTGGTTTG CTTGGTACGT CTCCACTCCC CTGCTCATTC CCGTGGGAGG GGAGGAACCC
GCCTCTTCTC CCGTTGCGGG TTCCCTGGTG ATGGAACCCG TGGAAGCCGT TTCATCCGAT
GGCACGGCTA TTGAAGGTTA TCTGGTGAGC CCGGGGCGTC CGGAGGCTTT GTCTCCGCGC
CAGAGCCGCG TGCGGGATAC TCTGAAATTG CGCGGGAAAA TGCCGCATTT GGAGGCAAAA
CCGGAGCTGG TTGTGATAGC CGCTTCTTGG AATGAGGGAG TGGAAAGTTC CCTCCCTCTG
GCGGAAGGGC TGGCAGGAGC CGGTTACACG AGCCTGATAT GGAATCCGCG CGGGAAGAAC
AATACCCGTC AATTCTGCAC GTACGGATTA AGGGAATATG CGGATGTAAC GGCGCTTTTG
GACGCCGTAT CCCGGAAGCA GGGCGGATTG CCTCCCGTGG CTGCCGTGGG GCAGGGATTT
GGTGCGGCCG TGCTGTTGAA AGCCGCGTCT GAAGATCCCC GCATCCGCTG CATGGTCAGC
ATGGACTGCT TTCCTTCCCT GAAAACCGTG GCTGTCCGGG AGATGGAGCA GGATTGGGGC
AAGCCTCTGT GCTATGCCGC TTATTGGCTG CTGGATGCCG GGGTGGATTG GCGTGCGGGG
TTCAGTACGT TTGACGTGGC TCCCGTGGAT GATGCCCTGA AATTGGATTA TCCGGTCATG
GTGGTTTGTA CGAACCAATA TTTTTTCTCC ACGCTGGAAG ATTGCCTGAG CATTTACGAT
TCCCTGAAAA ATGAGAAAAA ACAGCTTTAT GAATCCATCC GGGAAGGGGA ACCGTATGGC
ACCCGGGAAC GGACTTTCCT GCATTCCATT GAAGGAAAGA AGGGGGAAAA ATTTGAAAAA
ATTTATAAGG TCAACGTCTA TGCGGGGGAT GACGAGCTGC AGGCTGGCAT TGCGGAATGG
ATTCATGAGA ATACGCGTAT GCCCATGCCC AGGGTGTTGC CTCATGAGTC TTACAGTGCG
CCCGTTACGG GTACCGCTCC TTCCGGTTCA TGA
 
Protein sequence
MFKRLVQLFL LFFLAAAGVL AWFAWYVSTP LLIPVGGEEP ASSPVAGSLV MEPVEAVSSD 
GTAIEGYLVS PGRPEALSPR QSRVRDTLKL RGKMPHLEAK PELVVIAASW NEGVESSLPL
AEGLAGAGYT SLIWNPRGKN NTRQFCTYGL REYADVTALL DAVSRKQGGL PPVAAVGQGF
GAAVLLKAAS EDPRIRCMVS MDCFPSLKTV AVREMEQDWG KPLCYAAYWL LDAGVDWRAG
FSTFDVAPVD DALKLDYPVM VVCTNQYFFS TLEDCLSIYD SLKNEKKQLY ESIREGEPYG
TRERTFLHSI EGKKGEKFEK IYKVNVYAGD DELQAGIAEW IHENTRMPMP RVLPHESYSA
PVTGTAPSGS