| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1505 |
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| Symbol | |
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| ID | 6275766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1797639 |
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| End bp | 1798763 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642613564 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001878107 |
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| Protein GI | 187735995 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.00249432 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGGAAA ACGAAACCAC TACTGCAGAA GAAACCGCCG TTACCACGCT GGCCCGTTTT
GAGGTTCCCA GCCGTCTGGA AAAAATTGAA GATCCGAATG ATGCGAATCA TTTGACCTTT
GTGGCGGAAC CGTTTGAAAA CGGTTACGGC CATACGCTTG GCAACTCCCT GCGCCGCGTT
CTTCTGGGTT CTCTTGAAGG CGCCGCCATT ACCTCCGTCC GCATCGCCGG TGCGCAGCAT
GAATTTTCCT CCCTGCCCGG TGTGGTGGAA GATGTGACGG AAATCGTGCT GAACCTGAAA
AAGGTCAAAT TCAAGCATAA CGGCAAGGAA CCGCGCCTGC TCTCTCTGCG CGTGCATAAG
CAGGGCGTTG TGACTGCTGC CGATATTGCC GACGACACCG TTTACCAGGT GGTCAATCCC
GATCAAATCA TTTGCACTCT GGATCAGGAC ACCATGTTCG AATGCGAATT CCAGGTTCGC
GTGGGCCGCG GTTTTGCCAC CGGCGATGAA AACAAGGTGC CGGATATGCC CATCGGCGTG
ATTCCGATCG ACTCCATTTT CTCTCCGGTT ACCCGCGTGA AGTATTCTGT GCAGAATACC
CGTGTGGGGC AGATGACTGA CTACGACAAG CTGATCCTTG AAGTCTGGAC GGACGGCCGC
ATCGCCCCCG CAGACGCCAT GCTCCAGGCT TCCGCCATTC TGCGCCATCA CCTGGACGTA
TTCGTCAACT ATGACGACAA GCAGGTCAAC TTTGAGGAAG CTCCTTCCGC CGTCCAGGAC
GAGGAAACGG CCCGCCTGCG CAAGTTGCTC AACATGAGCG TCAACGAAAT CGAGCTTTCC
GTGCGTGCCG CCAACTGCCT CAACAATGCC AATATCACGA CCGTTGGCCA GCTTGCCATG
AAGAGCGAAA GCGAAATGCT CAAGTACCGC AATTTCGGCA AAAAATCCCT CAACGAAATC
AAGGACAAAT TGCTGGAACT GGGTCTTTCC CTGGGCGTTC AGGTGGATCC ATCCCTGCTT
ACCGGTCCCG TGCCGCAGGC CAAGCCGCGC CTGGGTCTGG AAGAGGAAAG CCCCGTGGGC
CTGGCAGACC TGATTGCCGC CAACATCGAA GACGACGACG ACTAA
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| Protein sequence | MSENETTTAE ETAVTTLARF EVPSRLEKIE DPNDANHLTF VAEPFENGYG HTLGNSLRRV
LLGSLEGAAI TSVRIAGAQH EFSSLPGVVE DVTEIVLNLK KVKFKHNGKE PRLLSLRVHK
QGVVTAADIA DDTVYQVVNP DQIICTLDQD TMFECEFQVR VGRGFATGDE NKVPDMPIGV
IPIDSIFSPV TRVKYSVQNT RVGQMTDYDK LILEVWTDGR IAPADAMLQA SAILRHHLDV
FVNYDDKQVN FEEAPSAVQD EETARLRKLL NMSVNEIELS VRAANCLNNA NITTVGQLAM
KSESEMLKYR NFGKKSLNEI KDKLLELGLS LGVQVDPSLL TGPVPQAKPR LGLEEESPVG
LADLIAANIE DDDD
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