| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1490 |
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| Symbol | |
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| ID | 6274567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1780160 |
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| End bp | 1782034 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642613550 |
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| Product | TrkA-C domain protein |
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| Protein accession | YP_001878093 |
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| Protein GI | 187735981 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.149438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCCTC TTCTCAACAT CAACTCCGCC TCCGTCATAG GCTGGCTGGA ATCAGCGGCC
GCCCAGCAAT GGATTGTAGG CATTCTGCTG GTCCTGTTAT TCATCAGCTT CATCAAGGAA
TGGATGCCCG TGGAAATCAC AGCCCTGACA GGCACCGCCG TCCTCATGCT CACGGGAATT
CTGAGCACGC GTGATGTGCT GTCCAGCTTT GCCAACAGCG GACCGCTGAC AGTGGTGTGC
ATGTTCATTC TGAGTGCTTC CCTGGAAAGA ACGGGATTAA TAGGAGACCT TTCCAAACTG
TTCAACAAGG TAGCCAAGGG GAGGGAACTG ACCGCCCTGC TGGTCATTAC ACTGGGAGCG
TTCATGGTTT CCCCCTTCGT CAACAACACC CCGGTGGTCG TCATCCTGAT GCCCATCGTG
CTGGCCTTCT GCAGGGATCA TAACATCGCG GCCTCCAAGC TGCTCATCCC CCTCTCCTAC
GCCACCATTC TGGGAGGCAC CTGCTCCGTG GTCGGAACAT CCACCAACGT AGTTGTGCTC
GGCCAGGTGC AGAAACTGGG TTATGACGGC ATCCAGATGT TCACGGTAAC GCCCATGGGC
CTGATTTATG CGGCGGCGGG CCTGCTCTAC CTCTGGACAT TAGGCCGCAA ATGGCTTCCA
TCCCGCCCCA CTTTGTCCAC CATGCTTCCG GGCGGCATCC AGCGCGATTT CCTGCTCCAG
GTCAGAATTC CCGCGGATTC CCCCCACATC GGCACCACTC CCATCAACCT GATGCAAACC
GAGTTGCTGG GCACCAAAAT CGTGGAAGTT CGCCGCAGGG GATTCTCCAT GCAGGAAGAG
CTGCAGCACA TCAACCTGGA AGAAGGAGAC CGCATTCTTT TCCTGTGCAA CGCCAGAAAA
GTCAACCAGG TGAGGGAAGC CAAAGGCGTG GACCTGGGCT GGGATGACAG CCGCGGGCTG
GAAACGCTGG AGCAGCGCGA TGTGCAAATC GTGGAAGGCA TGATCGCCAA CAATTCCGAA
TTCGCCGGGC TGTCCCTGTC CGAACTCAAG CTGCGCCAGA GATTCAACAT CTTCGTGCTC
GCCATCCACA GGCAGGGCAA AAACATCACG GACATGGGGC CGAACACCAA GCTGGCGGCA
GGGGACACGC TTCTTCTGGA AGGACCGCAG GAAGGAATGA ACCGCATCCT GACCAAGCAG
CGCATCATCC CCCTGAGCCA GCGTCCTGCG GAAGCGCACA ACCGCAGCAA ACAGGGCTGG
GCCATCCTGG CCATGGGGCT GTTCATTTTT ATCGGCCTGC TGGGCTCCTT TGAGCAATAC
GGGGAATTCT TCAAATTCTT CGCGCGCTTC AATCCCTTCT ATCTCGCCTA CATCGGAGCT
CTCATCGTCA TCATCTCCGG CTGCATCAAG CCGAAGGAAG CCTACCAGGC GGTGGACTGG
GGCATTATTT TTCTGATTCT GGGAATGCTG TGCGTGGGAG AAGCCATGAG CAAAACCGGG
CTTGCCAAAG CCATTGCTTT CGGCGTAGTG GATAATATAG GCCCGTTGGG GTGCCTGGTC
GCCATCTCCG GCCTGTACCT GATCTGCTCT ATCCTGACGG AGATGATCTC CAACAATGCC
GTAGCGGCCG TCATGGGGCC TCTGGCTTAT GAAATGGCCC TGCAATTCGA CGCCAACCCC
ATTCCCTTCA TTCTGGCTGT CATGTTCGGC GCCAGCGCCA GCTTCTCCAC CCCCATCGGC
TACCAGACCA ACACTTACGT GTACAATGCG GGCGGTTACA AATTTAAGGA CTTCGTCAAA
GTGGGACTCC CCCTCAACCT GCTCCTCTGG GTCATTTTTA CCTGCGCCAT CGGCTGGTTG
TATCCGCTCA AGTAG
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| Protein sequence | MLPLLNINSA SVIGWLESAA AQQWIVGILL VLLFISFIKE WMPVEITALT GTAVLMLTGI
LSTRDVLSSF ANSGPLTVVC MFILSASLER TGLIGDLSKL FNKVAKGREL TALLVITLGA
FMVSPFVNNT PVVVILMPIV LAFCRDHNIA ASKLLIPLSY ATILGGTCSV VGTSTNVVVL
GQVQKLGYDG IQMFTVTPMG LIYAAAGLLY LWTLGRKWLP SRPTLSTMLP GGIQRDFLLQ
VRIPADSPHI GTTPINLMQT ELLGTKIVEV RRRGFSMQEE LQHINLEEGD RILFLCNARK
VNQVREAKGV DLGWDDSRGL ETLEQRDVQI VEGMIANNSE FAGLSLSELK LRQRFNIFVL
AIHRQGKNIT DMGPNTKLAA GDTLLLEGPQ EGMNRILTKQ RIIPLSQRPA EAHNRSKQGW
AILAMGLFIF IGLLGSFEQY GEFFKFFARF NPFYLAYIGA LIVIISGCIK PKEAYQAVDW
GIIFLILGML CVGEAMSKTG LAKAIAFGVV DNIGPLGCLV AISGLYLICS ILTEMISNNA
VAAVMGPLAY EMALQFDANP IPFILAVMFG ASASFSTPIG YQTNTYVYNA GGYKFKDFVK
VGLPLNLLLW VIFTCAIGWL YPLK
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