Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1477 |
Symbol | |
ID | 6274444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1768113 |
End bp | 1768982 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642613537 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_001878080 |
Protein GI | 187735968 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.254456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.376978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGG TCATTGGATA CACGCTGGGC GACCAGTCGG GCATAGGCCC GGAAGTCATC TCCGCCGCGC TTGCCTCCGG AGAACTCCCG GAAGATGCGG AATACCGCCT CATCGGCAAG AGAGTGGAGC TTCCCCCGGG AAGGCCTAAT GCGGAATCCG CCAAACACGC CTTCGACCAT CTGGAACAGG CGGCCCATGC CCTGCGGGAA GGAACGGTTG ACGCTGTTGT CACCGCCCCC GTCTGCAAGG AAACCCTGCA TGAGGCAGGT TTCCGCTGGC CGGGGCAGAC GGAATTCTTT GCAGAACGCC TGAAAACGGA CAATTACGCC ATGTGCCTGA CCGGGAAACG GTTGACGGTG GGGCTGGCAA CCATTCATAC TTCCCTCCAA AGCGTGCCTT CCCTGCTGGA AACAGAGGAA CTGGTCCGCA TCGGAACCCT GCTGAAAGAC TTCTGCATCC GCAAAGGAAT CATGCGCCCG CGTATCGCCC TGGCAGCCCT GAACCCCCAC GCCGGGGAAC ACGGCGCTTT CGGCGATGAG GACGGGAACA TCATTGCCCC GGCCGTGGAA CGGCTGAGGG CGATCCATCC GGATGCTGCA TTTGACGGGC CTTCCGTCCC GGACTGCGTG TACCGGGATG CCGTGGAAGG AAACTATGAC GCCGTGCTGG CCCCTTACCA TGACCAGGGG TTGATTCCGC TGAAGCTGGT GGACTTCCAT ACCGCCGTCA ACGTCACCCT GGGCCTTCCC CGCCCCCGGC TGAGCCCGGA CCATGGTACC GCCTTCAACC TGGCGGGAAC CGGAAAAGCC AATCCGTCCA GCACCATCCA CGCCTTCCAG CTGGCCGTAC AGATGGCGCG GAGGCGTTAA
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Protein sequence | MKPVIGYTLG DQSGIGPEVI SAALASGELP EDAEYRLIGK RVELPPGRPN AESAKHAFDH LEQAAHALRE GTVDAVVTAP VCKETLHEAG FRWPGQTEFF AERLKTDNYA MCLTGKRLTV GLATIHTSLQ SVPSLLETEE LVRIGTLLKD FCIRKGIMRP RIALAALNPH AGEHGAFGDE DGNIIAPAVE RLRAIHPDAA FDGPSVPDCV YRDAVEGNYD AVLAPYHDQG LIPLKLVDFH TAVNVTLGLP RPRLSPDHGT AFNLAGTGKA NPSSTIHAFQ LAVQMARRR
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