Gene Amuc_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1469 
Symbol 
ID6274478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1760646 
End bp1761368 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content55% 
IMG OID642613529 
Producthypothetical protein 
Protein accessionYP_001878072 
Protein GI187735960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.498929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTA AAACGCTCAA AATTCTCATC ATCCCTTTTC TGCTGTCCGT CATGCTCGGC 
GGCACTTACC TGATGCCACG CAGGGGGGAA GTGCAGGACT CCTCCATCAG CATGGATCTC
CCCACAGGCA TGAATCCGTA CGGCTGGCAC GGCACGCGCC GGCAGGAATC CGAACAGGAA
CGGGGCATCC TGGCCCCGGA TACGGAATTT TCCAAAGCGG ATTACGTGCA GGAACTCCCC
ATCAGTCTGG ATGCGACGGA AACCGTACCC GTTTTGTGCC GCGTTTCCAT CGTGAAATCC
GGTCATGATT TAAACAACTC CATCCACCGT CCGGAACGCT GCCTCCCGGC CCAGGGCCAT
TTTAACCTGA CGGGGACCAC GGTGGATGTT CCCGTGGAAG GCCGCGGAAC CATCAGAATG
ACCAAGCTGA AATCCCAGCA GAACATCGCT CCGGACCATC CGCAACCTGT CATTCTGGAC
AGTATGCATT ATTACGTATT TATCGGCCAC CGCCACATGA CGGAAGACCA CTTGATCCGC
ACCCTGATGG ATATGAAAGA CAGGGTTCTG CACGGCATGG ATCAACGCTG GTGCTATTTC
CAAATTTCCA CCACGTACGG GGACAAGATC AGAGTGCCGG AAGAGAAAGC CAGGGAACAG
ACGGAACGCC TTATCAGCCA ACTTCTTTCC CAACTGGTGA AGTGGGATGA ACTGAACCGG
TAG
 
Protein sequence
MNIKTLKILI IPFLLSVMLG GTYLMPRRGE VQDSSISMDL PTGMNPYGWH GTRRQESEQE 
RGILAPDTEF SKADYVQELP ISLDATETVP VLCRVSIVKS GHDLNNSIHR PERCLPAQGH
FNLTGTTVDV PVEGRGTIRM TKLKSQQNIA PDHPQPVILD SMHYYVFIGH RHMTEDHLIR
TLMDMKDRVL HGMDQRWCYF QISTTYGDKI RVPEEKAREQ TERLISQLLS QLVKWDELNR