Gene Amuc_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1458 
Symbol 
ID6275712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1749783 
End bp1750073 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content60% 
IMG OID642613518 
Productprotein of unknown function DUF167 
Protein accessionYP_001878061 
Protein GI187735949 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00251] conserved hypothetical protein TIGR00251 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGG CTCTGAAAGT TATTCCCAAT GCGAAGAAGA GCGAGGCCGT GGGATGGGAG 
GAAGATCCCC GTGCCGGCCG CGCGCTGAAG CTGCGCATTG CCGCGCCTCC CGTGGAGGGA
AAGGCGAACA AGGCCGTCGT CCTTTTCCTG TCCGCTTGGC TGGATATTCC CCGTTCCTCC
ATCAGCTTTC TGCGCGGGGA ATCCTCCCGG CTGAAAGTGG TGGAATTGCC GGACGGATGC
GAGGGAAAAC TTGCCCGGCT GCTTTCTGCG GAGGATGTTT CCGGCGCTTA G
 
Protein sequence
MKLALKVIPN AKKSEAVGWE EDPRAGRALK LRIAAPPVEG KANKAVVLFL SAWLDIPRSS 
ISFLRGESSR LKVVELPDGC EGKLARLLSA EDVSGA