| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1446 |
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| Symbol | |
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| ID | 6274549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1735780 |
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| End bp | 1737264 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642613505 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001878049 |
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| Protein GI | 187735937 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.233096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCCA TTTCCTTTCT GAATCATCTC GGAGCCCTGC TGACGCTCTG GCTTCTCCTA
TGCTGCGGCG CACCAGCGGC GGAAAACGGC AGAATCCTGA TGGTGACGGA AGCGACTTTC
CCTCCCTACG AATTCCGGGA CGGAAACGCC ATCCTGGGCA TTGACCCGGA AATCATGCGG
GAGGTAGCCC AGCGCACCGG CAGGGAGCTG GTCATTGAAG ACATGAGCTT TGATTCCGTG
ATTACGGCTG TAGTTTCCGG AAAGGCGGAC GTAGCCGCCT CCGGAATCAC GGTTACGCCG
GAACGCAGGA GGAAAGTGGA CTTCTCCATT CCCTATGTGG AAGCCGCTCA GGTTATCATC
GTTCCCAAAG GTTCTCCCAT CCGGAAGCGG GAAGATATCC GCGGCAAAAG AATCGGAGTG
CAGCACGGGG CCACGGGAGA CATTTACGTC ACACGGAACA TCCAGCAGCC GGAACGCTTC
CCTAACGGAG CGCTGGCTGT GGCCGCCGTG GCGGCAGGCA AGGTGGACGC CGCCGTCATT
GACCAGGATC CGGCAACAAT GTACGTAGCG GGCAATGATC GGCTGGAAAT TCTGCCGGAG
CCCCTCACTT CCGAATCCTA CGCCATTGCC GTCCGCAAGG GAGATACGGC TCTCCTTCAG
GATATTAACG GCACCATTGC AGCATTGAAA GCCTCCGGAA AGCTGGAGGA AATACGGAAC
GCTTATGCGG CCATGCAGGT TAAATCCGCT GCCGGTCCCG AACAACACGC TTCCGGAGGG
GGCTGGCTGG AAAATATATG GCTGGACCTG AAAGAATCCT TTTATGTCAA TTTCATGCAG
GAAGGCCGCT GGAAATACCT GACCAACGGC TTTCTGGTGA CGGTGGAGGT CTCTTTCTTT
TCCGTTCTGC TGGGCATTCT GGTTGGCTTT GTGGTGGCCG TCATCCGCGC CACGCATGAC
AAAACGGGCA ATCTCCGTTT CCTGAATGCC CTCTGCAAAC TGTACCTGAC AGTCATCCGC
GGCACGCCGG TGGTCGTTCA ACTGCTCATG ATCTATTTTG TCATCTTCGG CTCCGTGGAT
GTCAGCAAAG TGTTGGTGGC CGTGGTGGCC TTCGGCTTCA ACTCAGGCGC CTATGTGGCG
GAAATCATCA GAGGCGGCAT CATGTCTATT GACAAAGGAC AATTTGAAGC CGGGCGCAGC
CTCGGCCTGG GATATGCCCA AACCATGATT TACATTATCC TGCCCCAGGC CTTTAAAAAT
GTACTTCCCT CTCTGGGAAA CGAATTTATC GTACTGTTGA AGGAGACCAG CGTCTCCGGC
TATATTGCCC TCCAGGACCT GACCAAGGGC GGCGACATCA TCCGGAGCCA GACTTATACC
GCCTTCATGC CGCTGACGGC CGTGGCCCTG ATTTACCTCT CCGTGGTCAT GCTGTTCAGC
TGGATGCTCG GCAAACTGGA AAGAAAACTG AAAAACAATG AATGA
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| Protein sequence | MPSISFLNHL GALLTLWLLL CCGAPAAENG RILMVTEATF PPYEFRDGNA ILGIDPEIMR
EVAQRTGREL VIEDMSFDSV ITAVVSGKAD VAASGITVTP ERRRKVDFSI PYVEAAQVII
VPKGSPIRKR EDIRGKRIGV QHGATGDIYV TRNIQQPERF PNGALAVAAV AAGKVDAAVI
DQDPATMYVA GNDRLEILPE PLTSESYAIA VRKGDTALLQ DINGTIAALK ASGKLEEIRN
AYAAMQVKSA AGPEQHASGG GWLENIWLDL KESFYVNFMQ EGRWKYLTNG FLVTVEVSFF
SVLLGILVGF VVAVIRATHD KTGNLRFLNA LCKLYLTVIR GTPVVVQLLM IYFVIFGSVD
VSKVLVAVVA FGFNSGAYVA EIIRGGIMSI DKGQFEAGRS LGLGYAQTMI YIILPQAFKN
VLPSLGNEFI VLLKETSVSG YIALQDLTKG GDIIRSQTYT AFMPLTAVAL IYLSVVMLFS
WMLGKLERKL KNNE
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