| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1442 |
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| Symbol | |
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| ID | 6275617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1731771 |
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| End bp | 1732463 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642613501 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001878045 |
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| Protein GI | 187735933 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.012114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.792542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGACTGG ATGCCCTTTT ATCCCGCTAC GGATATTGTT CCAGGAGGGA AGCGCCGGGT
TGGATCAAAC GCCACTCCAT TACATTCAAG GGAAAACCAT GCTCCTCCCC CACGGACAAG
GTGCAGGCGG AAGGCATCCT GCTGGACGGA GAACCTGTGG AATTCCCGGA CGGCCTGTAC
GCCGCCCTTT ACAAACCTGA AGGGTACACC TGCAGCCATG ACGACGGGGA AGGGAATTTG
ATTTACGACC TACTGCCCTT CCAGTGGCGG CACAGGAACC CTGCGGTTTC TTCCGTAGGA
CGGCTGGACA AGGAAACTTC CGGCCTGCTT CTCCTCACGG ACGACGGAAA ATTCATCCAC
CGCATGACCT CCCCCCGCCA TCACGTCGCC AAAGTTTACG AAGCCGTCAC GGAGGAGGAC
ATTCCGACAG AAGCCGTGGA GTTGTTCGCC TCCGGAACCC TCACGCTGAA CGGGGAAACC
CGCCCCTGCG CCCCCGCCTT GCTGGAAATC CGGGAACCGC GACGCGCCCT GCTGACGCTT
ACGGAAGGAA AATACCACCA GGTTCGCCGC ATGCTGGCTG CCGTAGGCGC TCCCGTCTTA
TCTCTGTGCC GTGTTTCCAT CGGCTCCCTG CATCTGGACA GCCTGAACCT GAAACCGGGG
GAATGGGCGC CCATCCGTCC GGATGCGCTG TAA
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| Protein sequence | MRLDALLSRY GYCSRREAPG WIKRHSITFK GKPCSSPTDK VQAEGILLDG EPVEFPDGLY
AALYKPEGYT CSHDDGEGNL IYDLLPFQWR HRNPAVSSVG RLDKETSGLL LLTDDGKFIH
RMTSPRHHVA KVYEAVTEED IPTEAVELFA SGTLTLNGET RPCAPALLEI REPRRALLTL
TEGKYHQVRR MLAAVGAPVL SLCRVSIGSL HLDSLNLKPG EWAPIRPDAL
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