| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1441 |
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| Symbol | |
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| ID | 6274459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1730980 |
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| End bp | 1731756 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613500 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001878044 |
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| Protein GI | 187735932 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0301733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.808281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGATTC CCATTTCCGA AGCACCAATT GCCTGTTTTC CGCACTTTGA GGTGGCGGCG
GAATCCGGGG ACTGGATTGT GGTGGACAAG GGAGCCCCCC TCATCGTCCA CCCGTCCAAC
GGGAAAAAGG AACCCTGCCT CCTGGAAGGC GTGGAAGCCC TGCTAAGCTA TGAAATAGCC
AACGGAGCCG CCCTCTCCCT GGTCAACAGA CTGGACAGGG AAACCAGCGG TCTGACGCTG
GTTGCCAAAC ACAAAAGGGC GGCCAGGGAG CTGGGAAGAG CCATGCAGCG GCGCCTGATA
CACAAGGAAT ATCTGGCAAT CGTGCAGGAA TGGCCTGAAT GGACGGAAAC AGCATGCACC
GCCCCCATTT TAAGACAGGG GGAAGTCGCG GAAAGCCGCA TATGGGTCAA ACAGGCCGTG
CACCCAGCCG GAAAAGCATG CACTACCGTT TTCCGGAAAG AACGGACATG GAATACACGC
CGGGGCCCCC TGGCGCTGGT CCGGTGCATT CCGGAAACGG GACGCATGCA CCAGATACGC
GTGCATCTGG CGCACCTGGG ACATCCCATC CTGGGTGACA AAATTTACGG CCCGTCCGAA
CATTGCTATC TGGAATACAT CCAGCACGGA TGGAGCCGGG AACTGGAGGA GCGGCTGGTT
CTGCCGCGCC ATGCGCTGCA TGCCTGCCGG CTGGAATTTC CGTTTGATGA AGAAACCTTC
ACCGCGGAAG CCCCCCTGCC GGAAGACATG CGGCTACTGC TTGAAACCGG GGATTAG
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| Protein sequence | MWIPISEAPI ACFPHFEVAA ESGDWIVVDK GAPLIVHPSN GKKEPCLLEG VEALLSYEIA
NGAALSLVNR LDRETSGLTL VAKHKRAARE LGRAMQRRLI HKEYLAIVQE WPEWTETACT
APILRQGEVA ESRIWVKQAV HPAGKACTTV FRKERTWNTR RGPLALVRCI PETGRMHQIR
VHLAHLGHPI LGDKIYGPSE HCYLEYIQHG WSRELEERLV LPRHALHACR LEFPFDEETF
TAEAPLPEDM RLLLETGD
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