Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1437 |
Symbol | |
ID | 6275610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 1723437 |
End bp | 1725587 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642613496 |
Product | hypothetical protein |
Protein accession | YP_001878040 |
Protein GI | 187735928 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3408] Glycogen debranching enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGG ACCGCATATT ATACAGGGGA GAGGCTTTTA CGCTGACCGG AAATTCCTTG CGCCAGGATG CCGCGCATTG GGCGGAGGTA CAGCCGGACG GTCAGGTGAA AACCATGAAA AACGGCCGCT ATTCCGAGTG GCGCATCTTT CCGGAAGCCG GGAACGCCCC GCATTACCGG GGAAATTTTG AAGTGCTTAA TCAGGCTTAC GGCCTGGCGT TGCATGAGGC TGGAGCCCTG CTTAATGAAG AAGGGATGTT CCGGACGGGA GCCAACTGGC CTACTGTGTG GACCCGGGAT ATTTCCTATT CCACCCATCT GGGATTGGGG TTGTGGAATG TCCGTGCCTG TATGAACAGT CTGAATGCAC GGGTCCGGAA CGGGGAGGTG GAGCAGGATA CCGGCACGGG CGGTTCCTGG CCCATTTCTT CCGACCGTGT GGTGTGGGGG ATGGCTGCGT GGGAAGTTTA CTGCCTGACG GGGGATGCCG ACTGGCTGTC CCTTTCCTGC CGAGTGATGG AAAAGACATG CATGAGGGAT GAACAGGTGC TTGCGGCCAC GGGCGGCTTG ATGAAGGGGG AATCGTCCGT GCTGGACTGG AGGGAGCAGA GCTACCCTGC GTGGATGACT TCTGCCGATA TTGGGGATTC TTGCAGCCTG TCCACCATGC TCCTGCATGC GGAGGCCCGC AAGATTCTGG CGCGGATGTT CCGGGAGCTG GGGCTGGAGG AGAAGGCCCG GGAGTGGGAG GAGAAGAGCG TTTCCCTGGC CGCGGTTATT GAGCGTTTTT TCAGGATTCC GGAACATGTC CTGTACGGGC AGTACCTGTA CGGACGCGGG TATCCCGTAC TGTCGGAGAA GGTGGATTCC CTGGGCAATC TGCTTTGCGT CCTTCTGGGG CAGGCTGGCG GTTCCCATGC CGCCGGGATG GTTGCCTCCC TTCCTCATGG CGTTTATGGC ATTCCCTGCA TCCATCCCCA GATGCCTGAT AGCGTGCCCG CCTACCATAA CCGCGCCATG TGGCCTTTCC TGGAGGGCTA TTATGCGCAG GCCGCGGCGG CGGTGGAGAA TGAATCTGCC CTGGCGCTGG CGGTCGCCTG CATGGTCCGT GCCGCCCTGT TGTGCGGCAC GAACAAGGAA AATGTCCTTC TGGAAACGGG GCTGGATGAG GGGCTGCTGC TCAGTTCGGA TAGCCAGCTC TGGAGTATTG CCGGCATGCT GGGCTGTTTT TACAAGGGAT TGTTCGGCAT CCGTCTGTCT CCGGATTCTC TGGAATTCCG TCCTTGCGTT CCAAAGTCTT TTGAAGGCGT TCATGAGTTG TCCGGGCTGG AATACCGCGG CATGACGGTA GATGTGTTTC TGCAGGGCTG CGGGCACCGG ATAGCGCGGT GCCTGGTCAA CGGGCAGGAG GCCCCTCCCG TCCTTTTGCC GGGCATGAAG GGGCGCGTTT TTGTGAAATT GGAGCTGGAC GGCGGAGAAG AGGATGAAGG GGCGGTGAAT TTAACCCGCA TGGGCAGCAG CCTGGAGTCT CCTGCGTGGA AGGCGGCGCG CCATGGTATT GCATGGGAGT CTGTGGAAGG AGCCGATTAT TACCGTGTTT ACCGGAATGG CATCCCTGTG TCTCAAACGG AGTACTGCCA TTATATCCCC GCACCCGGCC GGGGGGACGT GTCTTTCCAG GTGATGGCAG TCGCTCTGGA TGGGAGGGAG TCTTATCTTA ATGAACCCAA TGATTATCCT TCTGCGGATT CCCGCATGGA GACGCGCCCC TGCGGCTTGA GCGGGGATGA AGTCTGGTTT TCCCGCGTCA CGGAATCCCC GGACGCTCTT TGTTACAATG TCAATATAGA TAAGCCCGGA GTGTACCGGG TGGACGCCTT TTTCGCTAAC GGCACTTATG ATGTTTCAGA CGGGAATACC TGCGCCCTGC GCAGTCTGTA CCTGAACGGC AGGCGCGCAG GCACGCTGGC TTTCCCCCAT ACGTCCCGTT CCGGAAACTG GGAGTATTTT ATTTATTCAA CGGCAGTGGA AACGGTGATG ACGCCCGGTC CCTGCCGTGT GGAAGTGGTG TATGATTCCT TTTCCGAAAA TATGAATCGT CTGGTGAATG ATATGGTGAT AAAACACCTT CGGTTTACCC GTATATCCTG A
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Protein sequence | MDQDRILYRG EAFTLTGNSL RQDAAHWAEV QPDGQVKTMK NGRYSEWRIF PEAGNAPHYR GNFEVLNQAY GLALHEAGAL LNEEGMFRTG ANWPTVWTRD ISYSTHLGLG LWNVRACMNS LNARVRNGEV EQDTGTGGSW PISSDRVVWG MAAWEVYCLT GDADWLSLSC RVMEKTCMRD EQVLAATGGL MKGESSVLDW REQSYPAWMT SADIGDSCSL STMLLHAEAR KILARMFREL GLEEKAREWE EKSVSLAAVI ERFFRIPEHV LYGQYLYGRG YPVLSEKVDS LGNLLCVLLG QAGGSHAAGM VASLPHGVYG IPCIHPQMPD SVPAYHNRAM WPFLEGYYAQ AAAAVENESA LALAVACMVR AALLCGTNKE NVLLETGLDE GLLLSSDSQL WSIAGMLGCF YKGLFGIRLS PDSLEFRPCV PKSFEGVHEL SGLEYRGMTV DVFLQGCGHR IARCLVNGQE APPVLLPGMK GRVFVKLELD GGEEDEGAVN LTRMGSSLES PAWKAARHGI AWESVEGADY YRVYRNGIPV SQTEYCHYIP APGRGDVSFQ VMAVALDGRE SYLNEPNDYP SADSRMETRP CGLSGDEVWF SRVTESPDAL CYNVNIDKPG VYRVDAFFAN GTYDVSDGNT CALRSLYLNG RRAGTLAFPH TSRSGNWEYF IYSTAVETVM TPGPCRVEVV YDSFSENMNR LVNDMVIKHL RFTRIS
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