| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1402 |
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| Symbol | |
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| ID | 6275608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1675473 |
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| End bp | 1676507 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642613459 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_001878007 |
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| Protein GI | 187735895 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.759509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAGT GTCCTGTTCC GGAGCCTGTT TCCGACCGTA TCCAGATGGC TCATGGCGGC
GGAGGCCGCT TGATGAATGA GCTGATCCGT TCCGTGTTTC TGAGCGCCTT CGGGTGCCCT
TCCGGAGGCG TGCAGAATGA CGCCGCCGTA TTGGAGATTC CTCCGGGGAG GCTGGCGATG
ACGACGGACA GCTTTGTGGT GCAGCCTTTG GAGTTTCCCG GCGGCTCCAT CGGTTCACTG
GCGGTGCACG GAACGGTGAA TGATCTCGCC ATGAGCGGCG CGGAGCCGTT GTATTTGACG
GCGGGCTTTA TTCTGGAAGA AGGGCTTCCG CTGGAAGTTC TGGCCCGCGT GGCACAAGAT
ATGGCTGCCG CGGCCCGTGC GGCGGGCGTC CGTATTGTGA CGGGGGATAC AAAAGTGGTG
GAGCGCGGAA AGGGGGACGG CATTTACATT AATACTGCCG GGGTTGGCAT CGTGCGCCAT
GGGTTGGAGA TCAGCCCTTC TTCCGTTCGT CCGGGGGATT CCGTGCTGCT CAGCGGGGAT
TTGGGGAGGC ACGGCATGAC GATTATGAGC CTGCGCGCCG GGCTGTCTTT CGGAGACGGC
CTGGAAAGTG ATTCCGCTCC GTTGCATGAA TCCGTGGCCG CCGTCATTCG TGCCGGCATT
CCCGTGCATT GCCTGCGTGA CGTGACCCGC GGCGGGTTGA CCGCCACTCT TTCGGAGATT
GCGGAATCTG CTGGCCTGAC AGTGAAGCTG AATGAAATGT CCATTCCCGT GCGTGAGGAT
GTCAGGGCGG CGTGCGGGCT GTTGGGGCTG GACCCTCTTC AAGTGGCCTG TGAGGGACGT
TATCTGGCTG TTCTTCCACG GGAGCATGAG GAAGAGGCCC TGAACCTGAT GCGCGGCTGC
GGCGTATCTG CCGGAGCCTG CGTCATAGGC CGGGTGGAGG AATTGGGGAC GGCGCCCCTG
CTGATGACGG GACTTCTTGG AGTGGAGCGG GTGTTGACGA TGCCTTCAGG AATGCAGCTT
CCCCGCATCT GCTGA
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| Protein sequence | MFECPVPEPV SDRIQMAHGG GGRLMNELIR SVFLSAFGCP SGGVQNDAAV LEIPPGRLAM
TTDSFVVQPL EFPGGSIGSL AVHGTVNDLA MSGAEPLYLT AGFILEEGLP LEVLARVAQD
MAAAARAAGV RIVTGDTKVV ERGKGDGIYI NTAGVGIVRH GLEISPSSVR PGDSVLLSGD
LGRHGMTIMS LRAGLSFGDG LESDSAPLHE SVAAVIRAGI PVHCLRDVTR GGLTATLSEI
AESAGLTVKL NEMSIPVRED VRAACGLLGL DPLQVACEGR YLAVLPREHE EEALNLMRGC
GVSAGACVIG RVEELGTAPL LMTGLLGVER VLTMPSGMQL PRIC
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