| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1397 |
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| Symbol | |
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| ID | 6275698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1669309 |
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| End bp | 1670583 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613454 |
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| Product | Histidine--tRNA ligase |
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| Protein accession | YP_001878002 |
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| Protein GI | 187735890 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000267418 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGACG CTCGCTTTCA ACCACTTCCC GGATTCCGCG ATTTTGCACC GGCGGATTGC
GCCGTGCGCA ACTATCTTTT CAACGCATGG AAGAAGGTGG CGCATCGTTA CGGATTCCTG
GAATGGGAGG GCCCGACTGT GGAAGCCACG GAGCTTTATC TTAAAAAGAG CGGAGGCGAG
CTGCCCACCC AGCTCTTCCG CTTCACGGAC CAGGGGGACC GGGACATCAC CATCCGCCCG
GAACTCACCG CCTCCCTGGG ACGCATCGCA GCCGCTTATC AGCGCGAATA CACCAAACCG
CTCAAGTGGT TTGAAATCGG CTCATGCTTC CGTTATGAAA AACCCCAGAA AGGGCGTCTG
CGCGAATTTT ATCAATTCAA TGCGGATATT CTGGGAGAAG CCTCCGCGTG GGCGGATTCC
GAACTGATAG CCCTGGCCAT CGACTGCATG AGGGAACTGG GCTTTACGCA AAACGACTTC
ATTGTGCGCG TCTCTGACCG GGAAGCCTGG ATCAGGTTTG CTTCGGAACA CGGCGTGCAG
GAACAGGATA TTCCCGCTTT CCTCGGCATC GTGGACAAAT TTGAACGTGA CCGCCCGGAA
GAATGCCAGC GCAAGCTGGA CGCCTTTCAT ATCAGCCGCG GCGATCTGGT GGCCTTCATT
GAAAACCCGC CCGCCGGAGC GTCCGAACGC TATGACATCC TGATGAAAGA CCTGACGGCC
CGCGGGCTGG ACGGCTATGT CAAGCTGGAC TTATCCGTAG TGCGCGGACT GGCATACTAC
ACCGGTCTGG TTTTTGAAAT CTTTGACACA CAGCGCAGCC TGCGCGCCGT AGCCGGTGGA
GGACGTTACG ACACGCTGGT AGGCGCCCTT TCCAACAACG CAGTGGACAT GCCGGCAACC
GGTTTTGCCA TGGGGGATGC CGTCATCACC CACCTTATTG AACAGACGCC CCATGCCAGG
GCGCTGAAAG ATGCGGCGCT GGCCTCCGCA GGCTGCGACA TCTTCATGGT TCAGGCATCT
GAAAGCCGCC GCGCGGAAGT TCTTGCCATC GTCTCCGCCC TCCGGGACCA GGGATACAGT
GTGGACCTTC CCCTCACGCT CACCAAAGTC AACGGACAGC TCCAGAAGGC CGTCAAATCC
GGCGCCCGCG CGGCCTTGAT CGTGGGAGAT GAATTCCCGG TCATGGAACT TCGCGACCTG
GGCGCGCGCA CCTCATCCCC CGTCGCCATG GACGACCTGT TTGACGCCGT GGCTTCACTC
ACCGGAAGCA ATTGA
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| Protein sequence | MPDARFQPLP GFRDFAPADC AVRNYLFNAW KKVAHRYGFL EWEGPTVEAT ELYLKKSGGE
LPTQLFRFTD QGDRDITIRP ELTASLGRIA AAYQREYTKP LKWFEIGSCF RYEKPQKGRL
REFYQFNADI LGEASAWADS ELIALAIDCM RELGFTQNDF IVRVSDREAW IRFASEHGVQ
EQDIPAFLGI VDKFERDRPE ECQRKLDAFH ISRGDLVAFI ENPPAGASER YDILMKDLTA
RGLDGYVKLD LSVVRGLAYY TGLVFEIFDT QRSLRAVAGG GRYDTLVGAL SNNAVDMPAT
GFAMGDAVIT HLIEQTPHAR ALKDAALASA GCDIFMVQAS ESRRAEVLAI VSALRDQGYS
VDLPLTLTKV NGQLQKAVKS GARAALIVGD EFPVMELRDL GARTSSPVAM DDLFDAVASL
TGSN
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