| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1384 |
|---|
| Symbol | |
|---|
| ID | 6275633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 1651999 |
|---|
| End bp | 1652823 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642613441 |
|---|
| Product | CDP-diacylglycerol/serine O-phosphatidyltransferase |
|---|
| Protein accession | YP_001877989 |
|---|
| Protein GI | 187735877 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1183] Phosphatidylserine synthase |
|---|
| TIGRFAM ID | [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.158502 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.00224398 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGA AGATTTTCCC GGACGAACCT GAGATTCCCA TTTTGCCTAA TTTGTTTACG
GCAGGGAACC TGGTGTGCGG TTTTTTCGCC ATTCTGACGA TTTTTGAGGG AATCAACCAG
GCGGACAGCG ACGCTGTGGC TGCTTTTTCC TATTATCAGA ATGCCACTTT TTTAATCTTC
GCGGCATGTT TGTTTGACTT GTTTGACGGC CGTATTGCCC GCATGCGCGG GCAGGACGGC
CCGTTCGGGC GGGAATTCGA TTCTCTGGCG GATATTGTCT CCTTCGGCAT TGCCCCGGCG
CTGCTGGTAG CCAAGGCCGT CCTGTTCCAG CTGTCCCCTC CGGAGGTGGG TTGGGGCATC
GGCATCCTGT ATCTGCTGTG CGCCGCGCTG CGCCTGGCGC GGTTTAATTG CATGGCGGCC
GCTCCCCGGA AGGAAGGCCA GAGCAGCGAT TTTGTGGGTC TGCCCGTTCC GATGGCGGCG
GGAGCCGTGG TCTCCACCAT GTACCTGGTG ATGTATCTGG CAGGCAGGGT TCCGGACGGG
GCCATGGACC TGGGCGTCTT CAAATACGTG ATTGCGCTGG CAATGGCGGG AGTCTCCATT
CTGATGATGA GCCGGGTGGT CTATCCCAGC TTCAAGCATA TCAACATGCG CACGCGGGGG
ACGATGTACG CGATTGTGTT CATCGTGCTG GCGGTCATCT GCATTTTCAA ATTCCCGTGG
GTGATGCCCG CAGTCATTTT TTCCATTTAT CTGCTTTACG GGCTGGTGCG GCCCTGGGTG
GCCCGCCGCT GGCGGAACAG GCTGGAAGCC CGTGATGGAG AATAG
|
|---|
| Protein sequence | MDKKIFPDEP EIPILPNLFT AGNLVCGFFA ILTIFEGINQ ADSDAVAAFS YYQNATFLIF
AACLFDLFDG RIARMRGQDG PFGREFDSLA DIVSFGIAPA LLVAKAVLFQ LSPPEVGWGI
GILYLLCAAL RLARFNCMAA APRKEGQSSD FVGLPVPMAA GAVVSTMYLV MYLAGRVPDG
AMDLGVFKYV IALAMAGVSI LMMSRVVYPS FKHINMRTRG TMYAIVFIVL AVICIFKFPW
VMPAVIFSIY LLYGLVRPWV ARRWRNRLEA RDGE
|
|---|
| |