| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1361 |
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| Symbol | |
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| ID | 6274721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1632243 |
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| End bp | 1632686 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642613417 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_001877966 |
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| Protein GI | 187735854 |
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| COG category | [K] Transcription
[S] Function unknown |
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| COG ID | [COG1598] Uncharacterized conserved protein
[COG2944] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00209269 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 6.37946e-19 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAATGA CTGAACAGGA CATGAAGGCG CTTGCCGGGA AATACAGCCG TTTCATCCGG
TGGAGCGATG AAGATAATTG CTACATCGGT TCCCTGCCTG ATTTTGAAAA GGACTGCACC
CACGGGGAAA CCCTGGAAGA AGTCAACCGC AACCTTCAGG AAGTGGCGGA AATGTATATT
GAACGTTATC TGGAAAAGGG AATGGAACTC CCCCAGCCCC GGTCCATAGC TATTTCTCCG
TCACCTTTCC GCGAAACAGG CAATGAAAAA AGCATTGCGC GGTTAAGGAA AAGCCAGGGA
ATGAGTCAGA AAGATTTTGC CGCCGTGCTG GGAGTCAGTC CTTCCACGCT GGTCAAATGG
GAACACGGCT TGCGGCGCCC CTGCGGCCCT TCCGCAAAAT TGCTTGACCT TATTGAAAAG
CATCCTGAAT TGATCAATTC CTGA
|
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| Protein sequence | MKMTEQDMKA LAGKYSRFIR WSDEDNCYIG SLPDFEKDCT HGETLEEVNR NLQEVAEMYI
ERYLEKGMEL PQPRSIAISP SPFRETGNEK SIARLRKSQG MSQKDFAAVL GVSPSTLVKW
EHGLRRPCGP SAKLLDLIEK HPELINS
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