Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1330 |
Symbol | |
ID | 6275839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1606901 |
End bp | 1607980 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642613386 |
Product | DNA-directed DNA polymerase |
Protein accession | YP_001877935 |
Protein GI | 187735823 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.64899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.124466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGA GAAAAATCAT CCATGTGGAT ATGGATGCCT TTTACGCATC CATAGAACAG CGGGACCATC CCGAATACCG CGGCAAGCCC ATCGCCGTAG GCAGGCCGGA AATGCGCGGC GTGGTGGCGG CGGCCAGTTA TGAGGCGCGC CGTTTCGGAG TGCGTTCCGC CATGCCTTCC ATGAAGGCTC TCAAGCTTTG CCCCCATCTG ATTTTCACCC GCAACCGCAT GGATGTGTAC AAGGCCGTCT CCGCGCAGAT ACACGCCATT TTCCACCGTT ACACAGATCT GGTGGAACCC CTTTCCCTGG ATGAAGCCTT TCTGGACGTC ACGGAAAACA AGCCGGGCAT TCCGCTGGCC GTCGACATTG CGAGGAGGAT TAAGAAGGAA ATCCGCCGGG AACTTCACCT GACGGCCTCC GCCGGCGTTT CCTACAATAA ATTCCTGGCA AAAATCGCTT CCGATTACCG TAAGCCGGAC GGGCTGTTCA CGATCCATCC ATCCCGGGCG GAAAAATTCA TCGCGGCACT TCCCATTGAA GCTTTCTGGG GAGTCGGGCA CGCCACCGCC GAACGCATGC GCGCCCTTTC CATCACCAAC GGGGCGCAGC TCCGGGCACG GGACAAAGAC TTCCTGGTAA GGCATTTCGG CAAAACAGGA GCCATCTTCT ACAACTTCGC CCGCGGTGTG GACGACCGCC CTGTGGAACC TTCCCGCATG CGCAAATCCG TGGGTTGTGA AGAAACCTAC CGGGAAAACG TCACCAGGGC GGAAGCGCTG GAACAACGCC TCCCCCTGCT GGCGGAAGAA CTCGCGGGGC GGCTGGCCCG TTCCGGCTTC CGGGGAAACA CCCTTACCCT GAAGGTTAAG TTCCCGGACT TTGTCCAGAA GACCCGCTGC GCGACCGTTC CGGAAATCCT GACGGAGAAA GAAGGAATTC TCCCCCTGGC CCGCACCCTG ATGGAAGAAC TGGATTCCGG GGACCGTACA TTCCGCCTTC TGGGGCTGTC CGTCTCCCAT CCCCAGGAAG AACAGCGGCA GGGCATCTGG GAACAGCTCT GGCTGGAGCT GGAGTATTAA
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Protein sequence | MNQRKIIHVD MDAFYASIEQ RDHPEYRGKP IAVGRPEMRG VVAAASYEAR RFGVRSAMPS MKALKLCPHL IFTRNRMDVY KAVSAQIHAI FHRYTDLVEP LSLDEAFLDV TENKPGIPLA VDIARRIKKE IRRELHLTAS AGVSYNKFLA KIASDYRKPD GLFTIHPSRA EKFIAALPIE AFWGVGHATA ERMRALSITN GAQLRARDKD FLVRHFGKTG AIFYNFARGV DDRPVEPSRM RKSVGCEETY RENVTRAEAL EQRLPLLAEE LAGRLARSGF RGNTLTLKVK FPDFVQKTRC ATVPEILTEK EGILPLARTL MEELDSGDRT FRLLGLSVSH PQEEQRQGIW EQLWLELEY
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