| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1304 |
|---|
| Symbol | |
|---|
| ID | 6274514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 1580500 |
|---|
| End bp | 1582254 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642613360 |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstA |
|---|
| Protein accession | YP_001877909 |
|---|
| Protein GI | 187735797 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0581] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.637055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGG ACTTCAGCCT TCCGCCCGCC CCCAAACGCC CCCTGGGGGA AGTCAATATC
TGGCTCGCCT CCATCGGGCT CTCCCTGGGC CTCATCATGA TTTTCGGCCT GCTGGGCATC
ATCGTCTTCA ACGGTCTGGA GGCCTTCTGG CCCAAAACTA TCCATGAACT GACGCTCGCC
CCTTCTTCAA AAGAAGAACA ACCGCTTGTC CTGTACGCCG GCATCACAAA GGACCAGACG
CGCCACGTCC CCGCAGACCC CGCCCATCCC GGCTCCACAG CCAGAGACGT GCGGGAATAC
CAGCTTTTCA CCGGCAGCAA GGAATCCTAT GGACAATCCT ACCGCTATGT GGACGCGCAC
AATGTCACTG CCTCCGCCAC CCCCAAAGGC CTTCTGTGCC TGGAACGCAT GGAGGGAGGG
AACACCCTGG TCAAACCTCT GGAACTCAAG CTGGCCTCCG GAGAAACCAT CCCCGCCGCC
TCACCGGAAT TCATGGAGGC TTTCCGCCGC GTGCTGGACC GGGAAACAGA CCTGAGGGAC
AGGGTCAAAA CCATTGACAC CAGGGACATC GGCTCCGTCA ATACCCGTCT GGCGGACGTC
AGACTGGATA TCAAGGCCAT AGAACGTTCC TACGACATCC GGGAAGAAAA CGGACGGCGT
ACGGCCGTCC CCAGGAAAAA CCCCATTCTC ACGGATATGG ACGACCCGGC CGGTGAACTG
GACCGGCTCC GCGCCAAAGA GGAACAGCTC AATGCCGAAT ACGCCCGGTA CACCGCGGAA
GCAGCCAAAC TGAGGGCTCA ACAGGGCCGA GACTCTCTTG TGTATGCCCT GGGAGACGGG
GAAAGAAAGG AAATCCGCAT GGATAAAATC GTTTACGGCT ACCAGCCGAA TGACCTGGGG
TTCTTCGGCA AATGCGGCGT CTTCCTCCAC AACCTGTACC ATTTCATCAC GGATGATCCG
CGGGAAGCCA ACACGGAGGG CGGCATCTTC CCCGCCATTT TCGGCACCTT CATCATGACT
TTGCTCATGA GTGTGCTGGT CACGCCCGTG GGGGTCATCG GAGCCATCTA CCTGAGGGAA
TACGCCAGAC AGGGGGCTCT GGTTCAGGCC GTGCGCATCT GCGTGAACAA CCTGGCGGGC
GTGCCTTCCA TCGTCTTCGG CGTTTTCGGC CTCGGCTTCT TCGTTTACTA TCTGGGAGGG
AGCATCGACG AACTTTTCTA CTGGAAAAAG CTGGCTGTGG ACAACACCCC CACCTTCGGG
ACCTCCGGCA TCCTGTGGGC ATCCCTCACG CTGGCCCTGA TGACGCTGCC CGTAGTCATC
GTCTCCACGG AGGAGGCACT CTCCGCCGTC CCCCGCGGGC TGCGGGAGGC TGCCCTGGCC
TGCGGGGCCT CCAAATGGCA GATGATTAAA CGCATCATCC TCCCCAGCGC CCTGCCGGGC
GTCATGACCG GCCTCATTCT GGCCATGGCC CGTGGCGCCG GAGAGGTAGC CCCACTCATG
GTCACGGGAG TGGTCAAGCT GGCCCCCTCC CTGCCCATTG ACGGGGAAGG CCCCTTCATC
CACCTGGAAC GCAAATTCAT GCATCTGGGC TTTCATATCT ACGACGTGGG CTTCCAGTCT
CCGGACTCGG ACGCCGCCCA GCCCATGGTT TTCGCCACCA CGCTGCTCCT CATCCTGCTG
GTGGTGGTCA TGAACCTCAC GGCCATCCTC ATCCGCAACC GCCTGCGCAA AAAATACGCG
GCCTCCAGCT TCTAA
|
|---|
| Protein sequence | MKQDFSLPPA PKRPLGEVNI WLASIGLSLG LIMIFGLLGI IVFNGLEAFW PKTIHELTLA
PSSKEEQPLV LYAGITKDQT RHVPADPAHP GSTARDVREY QLFTGSKESY GQSYRYVDAH
NVTASATPKG LLCLERMEGG NTLVKPLELK LASGETIPAA SPEFMEAFRR VLDRETDLRD
RVKTIDTRDI GSVNTRLADV RLDIKAIERS YDIREENGRR TAVPRKNPIL TDMDDPAGEL
DRLRAKEEQL NAEYARYTAE AAKLRAQQGR DSLVYALGDG ERKEIRMDKI VYGYQPNDLG
FFGKCGVFLH NLYHFITDDP REANTEGGIF PAIFGTFIMT LLMSVLVTPV GVIGAIYLRE
YARQGALVQA VRICVNNLAG VPSIVFGVFG LGFFVYYLGG SIDELFYWKK LAVDNTPTFG
TSGILWASLT LALMTLPVVI VSTEEALSAV PRGLREAALA CGASKWQMIK RIILPSALPG
VMTGLILAMA RGAGEVAPLM VTGVVKLAPS LPIDGEGPFI HLERKFMHLG FHIYDVGFQS
PDSDAAQPMV FATTLLLILL VVVMNLTAIL IRNRLRKKYA ASSF
|
|---|
| |