Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1296 |
Symbol | |
ID | 6274079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1572102 |
End bp | 1572899 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642613352 |
Product | ABC transporter related |
Protein accession | YP_001877901 |
Protein GI | 187735789 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGAT TATCCATACG AAACGTTTCC AAAAGTTATT TTTCCAGAAA AAAATCGCTT CTGGCGCTTT CTTCTGCCAA TCTGGACATA GGGGAAGGAG AATTCATCTG CCTGGTAGGT CCAAGCGGTT GTGGCAAAAC AACTCTGCTG AATATGATCG CCGGTCTGAT CAAATCGGAT ACGGGAAGCA TTTCCTATGA TGGAGAAATA ATCTCAGGTC CTGGACCGGA CAGGACAGTC GTTTTTCAGG ATTTCGCCCT GTTCCCGTGG TTAAACGTGC TGCACAATGT AGAATTCGGT CTCCGATTTA CCGGAATTCC CCGCAGAAAA CGTTGCCAAA TAGCTTTGAA AAACCTGAAA TCAGTAGGCT TGGACAACTT CACGCAAGCT CGTATCCATG AACTCTCCGG AGGAATGAAA CAACGCGTAG CCATAGCCCG GGCTCTTGCA TTGCGCCCCA GGGTTCTTCT GATGGATGAG CCCTTCGCGG CATTGGATGC CATGACCAGG GAACAACTTT ATGCGGATAT CCAGGCCATT TGTGCCGGAC ATGGGATTAC CGTCGTCTTT GTTACTCATA ATGTACGGGA AGCCGTATGC CTGGGAGACA GAGTCATTTT ATTTTCCTCC CACCCTGGAC GTATTTGCGG AGAATTCTGC ATTCGTTTGC CGCGACCGCG CCAAATCAAT GATCCGGGAG TAGCCCGGCT ATCCTCAAAC ATCACACGTG CATTAAAATT GGTTTCCAGA ACCGCAGAAG AAAAACAAGA CACACAGACA TCATGCATTC TTCCATAA
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Protein sequence | MSRLSIRNVS KSYFSRKKSL LALSSANLDI GEGEFICLVG PSGCGKTTLL NMIAGLIKSD TGSISYDGEI ISGPGPDRTV VFQDFALFPW LNVLHNVEFG LRFTGIPRRK RCQIALKNLK SVGLDNFTQA RIHELSGGMK QRVAIARALA LRPRVLLMDE PFAALDAMTR EQLYADIQAI CAGHGITVVF VTHNVREAVC LGDRVILFSS HPGRICGEFC IRLPRPRQIN DPGVARLSSN ITRALKLVSR TAEEKQDTQT SCILP
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