Gene Amuc_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1287 
Symbol 
ID6273850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1560065 
End bp1560697 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content60% 
IMG OID642613344 
Productprotein of unknown function DUF1121 
Protein accessionYP_001877893 
Protein GI187735781 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACC CCCTTTCATT GGAGCAATGT GCCGGACGTC TGGAACGGCG TGGATTCCGG 
AGTTTTGTAG TGCCGGACCT GAGGGCGGCT GCGGAGGTTA TGCGCGGCCT GGTGCGGGAG
TTCAGGCCGT CGTCCGCTTC CTATGGGGAT TCCATGACCC TGAAGGATGC GGGCATTCTT
GATGACCTGC GCTCCAATCC GGACATTCAG TTCTATGACG GCTTTGTTCC GGGCATGGTG
CGGGAGGAGA AATGGGAAAT CCGCCGCCAG GGCATGACGG CGGACCTGTT TTTAACCGGC
GTCAATGCCG TCAGCATGGA AGGGACCCTG CACTGGGTGG ACATGGTGGG CAACCGTGTG
GCTCCGGTGG CATTCGGACC CCGGCGCGTC ATTTTGCTGG CCGGTTCCAA CAAGCTGGTG
GCAACGCCGG CAGAGGCCCG GGAACGCATC CGCCGCATTG CGCCCCTGAA CGCCAGGCGG
CATGAAGGGT TCAGGACTCC CTGCATGCAC ACCGGAATCT GCGCGGATTG TAATTCCCCG
GACCGCCTGT GCAATATTCA CATGTCCATT GTTAAATGCT TTCCCGAGGG AAGAATTTCC
GTCATTCTGA TGGAAGAACC CGGAGGACTT TGA
 
Protein sequence
MEDPLSLEQC AGRLERRGFR SFVVPDLRAA AEVMRGLVRE FRPSSASYGD SMTLKDAGIL 
DDLRSNPDIQ FYDGFVPGMV REEKWEIRRQ GMTADLFLTG VNAVSMEGTL HWVDMVGNRV
APVAFGPRRV ILLAGSNKLV ATPAEARERI RRIAPLNARR HEGFRTPCMH TGICADCNSP
DRLCNIHMSI VKCFPEGRIS VILMEEPGGL