| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1286 |
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| Symbol | |
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| ID | 6275539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1557384 |
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| End bp | 1560005 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613343 |
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| Product | DNA gyrase, A subunit |
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| Protein accession | YP_001877892 |
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| Protein GI | 187735780 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATA ATAGAATCAA ACCGGTGGAT GTAGCCAGTG AGCTCTCCAC TTCTTTCCTG
GACTACTCCA TGTCCGTCAT CATCTCCCGC GCCCTGCCGG ACGTGAGAGA CGGCCTCAAA
CCTTCCCAGC GGCGCATCCT GTACGCCATG AAGGAACTCA ATCTGTCCCC TGGGGGCAAG
ACCCGCAAAT GCTCCAAAAT CGTGGGCGAC ACGATGGGTA ACTACCACCC TCACGGGGAT
GCCGCCATTT ACGGCACCCT GGTGAACATG GCGCAGGACT GGTCCATGCG GGATATTCTC
GTGATCGGCC AGGGCAACTT CGGCACGCCG GATGGAGACC CCCCCGCCGC TGCCCGATAC
ACGGAAGCCA AGCTCTCCGG CATGGGCGTG GCCCTGATGG CGGATTTGGA CAAGGACACC
GTGGATTTTG TTCCCACATA CGACAATGAA CACACGGAAC CCACCGTGTT TCCCTCCGCT
TTCCCAAACC TTCTGGTGAA CGGCGGCACG GGGATTGCCG TGGGGATGGC CACCAACATG
CCTCCGCACA ACCTGGGGGA AGTGGTGGAC GGTATCTGCG CCGTGATTGA CAATCCCCAC
ATGACTGTGG AAGAGCTGCG CCAGTACATC AAGGGGCCGG ATTTTCCCAC CGGGGGCGAC
GTGCTGGGCT TTTCAGGCAT TGACAACTAC TTCCGCACCG GGCGCGGCTC CGTGCGCATC
CGCGGCAAGA TAGACATGGA AGTAACGGAT TCCGGCAAGG ATCTTCTCAT CATCCGGGAA
GTGCCGTATG GCGTGAACCG CGCCGCCCTT CAGGAACGCA TTGCGGAACT GTACAAGGAT
AAAATCCTGA CGGATATTTC CGGCATCCGT GACCTTTCCG ATGAGAAAAC CTGCATTGAA
ATCGAGCTGA AGCGGGATGC CCGCCCGCAG GTGGTCATGA ACCAGCTTTA CAAGCTCACC
TCCATGGAAA CTTCCTTTGC GGTGAATATG CTGGCGATTC ATGACAACCG CCCCAAGACG
CTCGCCATGA TGGACGCCAT CAACTTCTAC ATCGAGCACC GCCGCGAGGT GGTCGTGCGC
CGCACGCGCT ATCTGCTGGG GGATGCGGAG AAGGATGCCG AGCGCCTGGA AGCCTTCCTG
CTGGCTCTGC ACCACATGGA TGACTTCATT TCCATTATCC GGGATTCCAA AAACCGGGAT
GAAGCCCGTG AACGCCTGCA GAATTACACA TTCTCCACGC AGACAGCGGA AAGCCTGGGC
ATCCTGATCC GTTCCCAGGC CTCCATCCAG GGGGACCGCT ACGTCTTCAC GGAACGCCAG
GTGAACTCCA TCCTGGACCT GCGCCTGTAC CAGTTGACCG CCTTGGAAAA CGACAAGATT
TCCGGGGAAT ACGCGGAACT GCTGGTCCGC ATCAAGGACT ACCTGGATAT TCTGGCGAAC
GAATCCCGCG TGCTGGGCAT TGTAAAGGAC GAACTGAAGG CGATTAAGGA CAAGTACGCC
ACGCCGCGCG TCACGCGCAT CATTCCCTTC TCCGGGGATA TGGCCATTGA GGATCTCATC
CCGAATGACA CGATGATCGT CACCATCACG CACAGCGGCT ACATCAAGCG CACCAACTCC
GCGGAATACC GCGTGCAGGC GCGCGGGGGC AAGGGCGTGA AGGCTGCCAC TACCAGGGGA
GCCAAAAAGG ATGCGGAAGC GGACTTTATC GAACACCTGT TCGCCGCCCA GAACCACGAC
TACCTGATGT TCTTTACGAA CACCGGGCGC GTGTACGTGG ACCGCGTGTA TGAGATTGAC
GAAGCGGCGC GCAGCGCGCA GGGTCGCAAT ATCAAGAATC TGCTGGATCT CCAGCCGGAA
GAAGCCATCG CTGCCATCCT GCGCCTGGAA CGCCGGGTGG ATGAAAAAGG CAATGACATT
ACCTTTGCGG AAGGCAGCGG CAATGTTGTT TTCGCCACGA AGGACGGCAC GGTGAAGAAA
ACCAGCCTGA ACGATTTCGC CAACTACCGC AAGGCCGGCA TCATTGCCAT TAATCTGGAG
GAAGGCAACA GTCTGGTGAA CGCGGAACTT ACCAGCGGGG CCGATGAAAT CGTGCTCGTC
ACGCATGACG GCATGAGCAT CCGCTTCCCG GAAGAAGATC TGCGTACGCA GGGCCGCAAC
ACCATCGGTG TTCGCGGCAT CCGCCCGCGG GCGGGGGACT ACGTTGTGGC CCTGGCCATT
GTGGACCCGC AGAAAACCCT GCTGGTGGCT TCTGAAAACG GCCTCGGCAA GCGCACTTCC
TTTGATGAAT ACCGCACGCA GGGCCGCGGC GGAACCGGCA TCAAGACCAT GAATTGCACG
GATAAGACCG GCAAGGTGGT TTCCGCCACG GTCGTGTCTG ATGAGGACGA GCTGATGCTG
ATGACCACGG CCGGACAATC CGTCCGCATC AAGGTGGCGA CCGTGCGTGA AACGGGCCGC
GCCACCCAGG GCGTGAAGCT CATGACGCTG AATGAGGGCG AATCCATCCA GGACATTTCC
ATCGTCATTC CTGATGATGA AGATGAAGAA GCCCCGGCGG AAACGGAAGA CGCGGGAGCC
GGGGAAGTGT CCGGTGAAAT GGAAGCTCCG GCGGAAGAAT AA
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| Protein sequence | MENNRIKPVD VASELSTSFL DYSMSVIISR ALPDVRDGLK PSQRRILYAM KELNLSPGGK
TRKCSKIVGD TMGNYHPHGD AAIYGTLVNM AQDWSMRDIL VIGQGNFGTP DGDPPAAARY
TEAKLSGMGV ALMADLDKDT VDFVPTYDNE HTEPTVFPSA FPNLLVNGGT GIAVGMATNM
PPHNLGEVVD GICAVIDNPH MTVEELRQYI KGPDFPTGGD VLGFSGIDNY FRTGRGSVRI
RGKIDMEVTD SGKDLLIIRE VPYGVNRAAL QERIAELYKD KILTDISGIR DLSDEKTCIE
IELKRDARPQ VVMNQLYKLT SMETSFAVNM LAIHDNRPKT LAMMDAINFY IEHRREVVVR
RTRYLLGDAE KDAERLEAFL LALHHMDDFI SIIRDSKNRD EARERLQNYT FSTQTAESLG
ILIRSQASIQ GDRYVFTERQ VNSILDLRLY QLTALENDKI SGEYAELLVR IKDYLDILAN
ESRVLGIVKD ELKAIKDKYA TPRVTRIIPF SGDMAIEDLI PNDTMIVTIT HSGYIKRTNS
AEYRVQARGG KGVKAATTRG AKKDAEADFI EHLFAAQNHD YLMFFTNTGR VYVDRVYEID
EAARSAQGRN IKNLLDLQPE EAIAAILRLE RRVDEKGNDI TFAEGSGNVV FATKDGTVKK
TSLNDFANYR KAGIIAINLE EGNSLVNAEL TSGADEIVLV THDGMSIRFP EEDLRTQGRN
TIGVRGIRPR AGDYVVALAI VDPQKTLLVA SENGLGKRTS FDEYRTQGRG GTGIKTMNCT
DKTGKVVSAT VVSDEDELML MTTAGQSVRI KVATVRETGR ATQGVKLMTL NEGESIQDIS
IVIPDDEDEE APAETEDAGA GEVSGEMEAP AEE
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