Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1279 |
Symbol | |
ID | 6274969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1541420 |
End bp | 1542271 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642613336 |
Product | phosphodiesterase YaeI |
Protein accession | YP_001877885 |
Protein GI | 187735773 |
COG category | [R] General function prediction only |
COG ID | [COG1408] Predicted phosphohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC ACCCTTTCTC CAAAAAGCGT TCCCAGCTTC GCAAGCTCCT GTATGCGGCC GCGGCTGTCA TTCTGCTGGG GTCCCTACTG GCCTCCTACA TGCATTGGGA AGCCAATCAT CTGGAATTTA ATGAAAACAC GGCCCCTGCC GGATGTGTAC CCGACCTTTC CGGCCTTCGT ATCCTGGTAT TGTCGGATAT CCACACCAAT CTGCCTCTGC TGGAAAAAGC GGCAACAATA GCGGAACAGG CCAGACCGGA CATGATCGTA TTTCTGGGAG ATCTGTACAC GGATTTTCTG CGGGTCACTC ATGCAGGCGA CTACATCACC CAGATGAAAC GCCTCTCCTC CGTCGCCCCG GCCTACGCAT GTCTGGGCAA CCATGACATG GCCCTTGCGG ACAATGTGGA ACGCGTCCTG AAGGAAGGGG GCTTCACACT GCTCAGGAAT TCCGCCGCCT TCGTCTCCAT CCCCAGGCTG GGAAATGTGG AATTCAAACT GGTGGGGCTG GGAGACCTGC GGGAGGGTGA CTTTTTCCCG GACCGGTGCA TGAGCCCGCG CGAATTGGAG GAAAACTCGC CCATGCCAAC CATCGTCCTG AGCCACAACC CCAAAGGAAG GGAATTGCTG GGAAATTACC GCTGGGACCT GATGCTCTCC GGCCATACGC ATGGAGGCCA AATCAAACTG CCTTTCTTTT CCACCCCGCT ATTGGCGTCG GAAGGGGAAA CCATGTACTC CGGGTTCCAT CCTTATGAGG ACAAGCAGGT ATTCGTCACC CGCGGCATAG GCTATATAGG GCCGGGCCGC TTCAACTGCC CGCCGGAAAT CAACCTCATA ACCATTCCCT AA
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Protein sequence | MTTHPFSKKR SQLRKLLYAA AAVILLGSLL ASYMHWEANH LEFNENTAPA GCVPDLSGLR ILVLSDIHTN LPLLEKAATI AEQARPDMIV FLGDLYTDFL RVTHAGDYIT QMKRLSSVAP AYACLGNHDM ALADNVERVL KEGGFTLLRN SAAFVSIPRL GNVEFKLVGL GDLREGDFFP DRCMSPRELE ENSPMPTIVL SHNPKGRELL GNYRWDLMLS GHTHGGQIKL PFFSTPLLAS EGETMYSGFH PYEDKQVFVT RGIGYIGPGR FNCPPEINLI TIP
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