| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1268 |
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| Symbol | |
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| ID | 6275811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1528758 |
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| End bp | 1530137 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642613325 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001877874 |
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| Protein GI | 187735762 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCATT ACAGCATTTT TGAGCTTTTC AGCATCGGCA TAGGTCCTTC ATCATCCCAT
ACCGTAGGGC CCATGCGGGC GGCGCACCGC TTTCTTGAAC AGATGCGCCA CTCCCCGCGC
TTGGCGGAAA TCTCAGGCAT CCGCTGCGAA TGCTACGGCT CCCTGGCCGC CACCGGACAT
GGGCACGGCA CAGACACAGC CATCATGCTG GGGCTTCTGG GGGAAGAACC CCATACGGTG
GAGCCGCGCA GCATTCCCGG AAAAATCGCC CGCCTGCACC AGCAGGAAAC GTTGTCCGTC
ACGGAAGAAA AAAACGTCCG CTTCTCTCCT TCCCGCGACC TGGATCTTTC CCACTACCAG
CCCCTGCGCC TGCATCCGAA CGGGATGCAG TTTACTGCCG TCAACCAGGA CGGAGACCCG
GTGGAAGACG CGGTATTTTA TTCCACGGGG GGCGGGTTCG TCTCTTCCGA ACAGGAACTT
CTGCATCCGG AAGAAAGGGA TCGGGAAACC TTCCCTTTTC CTTATGAATC CGCGGAGGAA
CTGCTGCACA TGGCTGATGA GCGTGGATGC CCTCTTTCCT CCATTGTCAT GGCAAACGAA
TGCGCCATGC TCCCGGAACG GGAAGTCCGT GAAAAACTGG ACCTGATCTG GGCGACGATG
AAGCAGTCCA TCTCCAACGG CATGAGCGCG CGCGGCAACC TGCCGGGCGT TCTGCAGGTT
CCGCGCCGGG CCAAAACTTT GCGCAAGAAT CTTCTGGTGC ACGGAGAATC GGCCTTGAAA
GACCCTCTCT CCATTATGGA CTGGATCAAT CTGTACGCCA TTGCCGTAAG TGAGGAAAAC
GCGGCCGGCG GCCGCATCGT CACCGCTCCG ACCAATGGAG CGGCGGGAAT CGTTCCGGCC
GTTCTTAACT ACGCCACCAA ATTCTGCGTT TCCCCGTATC CGGATGCCGT GCATCGCTTC
CTGCTCACCG CCGGGGGAAT CGCCATCCTG TACAAGAAAA ACGCCTCCAT TTCCGGCGCG
GACGTAGGCT GCCAGGGAGA AGTGGGAGTA GCCTGCTCCA TGGCCGCCGC CGCTCTTGCG
GAGTACCTGG GGGGAACACC CCACCAGGTG GAAAACGCCG CGGAAATAGG CATGGAGCAC
AATCTGGGCC TCACCTGCGA TCCTATTGCG GGCCTCGTCC AGATACCCTG CATTGAGCGC
AACGCCATCG CCGCCATCAA GGCCATCAAC GCCGCCCGCA TGGCCCTGGG CGGCACGGGC
GCTCATTTTG TCCCGCTGGA CAAGGTCATC CGCACCATGC TGGACACCGG AAGGGACATG
CAATCCAAAT ACAAGGAGAC CGCCCAGGGC GGCTTGGCCG TCAACGTGGT GAATTGCTGA
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| Protein sequence | MHHYSIFELF SIGIGPSSSH TVGPMRAAHR FLEQMRHSPR LAEISGIRCE CYGSLAATGH
GHGTDTAIML GLLGEEPHTV EPRSIPGKIA RLHQQETLSV TEEKNVRFSP SRDLDLSHYQ
PLRLHPNGMQ FTAVNQDGDP VEDAVFYSTG GGFVSSEQEL LHPEERDRET FPFPYESAEE
LLHMADERGC PLSSIVMANE CAMLPEREVR EKLDLIWATM KQSISNGMSA RGNLPGVLQV
PRRAKTLRKN LLVHGESALK DPLSIMDWIN LYAIAVSEEN AAGGRIVTAP TNGAAGIVPA
VLNYATKFCV SPYPDAVHRF LLTAGGIAIL YKKNASISGA DVGCQGEVGV ACSMAAAALA
EYLGGTPHQV ENAAEIGMEH NLGLTCDPIA GLVQIPCIER NAIAAIKAIN AARMALGGTG
AHFVPLDKVI RTMLDTGRDM QSKYKETAQG GLAVNVVNC
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