Gene Amuc_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1263 
Symbol 
ID6275563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1523804 
End bp1524667 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content59% 
IMG OID642613320 
Productnicotinate-nucleotide pyrophosphorylase 
Protein accessionYP_001877869 
Protein GI187735757 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCAG AAACCGTATC CGACAACGTG GAAACCCTGA TCAATCTGGC GCTGGCCGAA 
GACTTCGGCT CCGGCGACGT GACTTCCACA TACTTCGTCC CGGAACATCT GACCGCCAGA
GCTATTTTGA CCCCCCGGAA AAAAGGCGTT CTTTCCGGCG TCAATGTCGC GGCGGAAGTT
TTCCGCAAGG TGGATCCCAC CCTGAAGGTG GAAGTTTACC TGCATGACGG GGAAGCCGTG
GCGCCCGGCG CCGTGGTGAT GCTTATTGAA GGGTCCGCCC GCTCCATTCT TGGGGCGGAA
CGCACCGCCC TCAACTTCAT CCAGCGTCTT TCCGGAGTAG CTACGCTCAC CAGACAATAT
GTGAAAGCCA TTTCCCACAC CAGCGCCCGC ATTCTGGATA CCCGCAAAAC CACTCCCGGC
TACCGTCTGC TGGAAAAAGC GGCCGTGCTC CATGGCGGAG GCACCAACCA CCGCATGGGC
CTTTATGACC GCGCCATGGT GAAAGACAAC CACCTGATGA CGGATGGAAA TACGGAACAC
CTTCAGGAAT GCATCAACAG GCTGCGTCAG GAAAAGCCCG GCGTGGAAAT CCAGCTGGAA
GCGGACACCC TGGAACAGGT GGGCAACTTC CTTAAACTGG AAGGCGTGGA CCATATCCTT
CTGGACAACA TGACGCCGGA AATGCTGAAA CAAGCCGTCG CCATGCGCGG AGGATGCACC
ACCCCCCTGC TGGAAGCCAG CGGAGGCGTT CACCTGGACA CGGTAGCCGC CATTGCGGAA
TCCGGCGTGG ACTTCGTCTC CGTAGGCTAC GTGACCCACT CGGCCCCCTC CCTGGACCTG
GGGCTGGATT TCAGCGTAGA ATAA
 
Protein sequence
MPAETVSDNV ETLINLALAE DFGSGDVTST YFVPEHLTAR AILTPRKKGV LSGVNVAAEV 
FRKVDPTLKV EVYLHDGEAV APGAVVMLIE GSARSILGAE RTALNFIQRL SGVATLTRQY
VKAISHTSAR ILDTRKTTPG YRLLEKAAVL HGGGTNHRMG LYDRAMVKDN HLMTDGNTEH
LQECINRLRQ EKPGVEIQLE ADTLEQVGNF LKLEGVDHIL LDNMTPEMLK QAVAMRGGCT
TPLLEASGGV HLDTVAAIAE SGVDFVSVGY VTHSAPSLDL GLDFSVE